Protein–RNA interactions for Protein: Q8IWL2

SFTPA1, Pulmonary surfactant-associated protein A1, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPA1Q8IWL2 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
SFTPA1Q8IWL2 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC26.08■■□□□ 1.77
SFTPA1Q8IWL2 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
SFTPA1Q8IWL2 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC26.07■■□□□ 1.76
SFTPA1Q8IWL2 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
SFTPA1Q8IWL2 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC26.06■■□□□ 1.76
SFTPA1Q8IWL2 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
SFTPA1Q8IWL2 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC26.05■■□□□ 1.76
SFTPA1Q8IWL2 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
SFTPA1Q8IWL2 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC26.04■■□□□ 1.76
SFTPA1Q8IWL2 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
SFTPA1Q8IWL2 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
SFTPA1Q8IWL2 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
SFTPA1Q8IWL2 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
SFTPA1Q8IWL2 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
SFTPA1Q8IWL2 RPS2-210ENST00000530225 765 ntTSL 2 BASIC26.02■■□□□ 1.76
SFTPA1Q8IWL2 AC148477.6-201ENST00000623746 465 ntBASIC26.02■■□□□ 1.76
SFTPA1Q8IWL2 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
SFTPA1Q8IWL2 MIR219A2-201ENST00000608502 1504 ntBASIC26.02■■□□□ 1.76
SFTPA1Q8IWL2 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
SFTPA1Q8IWL2 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
SFTPA1Q8IWL2 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
SFTPA1Q8IWL2 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC26.01■■□□□ 1.75
SFTPA1Q8IWL2 MEST-211ENST00000437945 1455 ntTSL 5 BASIC26.01■■□□□ 1.75
SFTPA1Q8IWL2 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC26.01■■□□□ 1.75
SFTPA1Q8IWL2 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC26■■□□□ 1.75
SFTPA1Q8IWL2 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC26■■□□□ 1.75
SFTPA1Q8IWL2 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC26■■□□□ 1.75
SFTPA1Q8IWL2 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC26■■□□□ 1.75
SFTPA1Q8IWL2 AC060814.1-201ENST00000554326 538 ntBASIC26■■□□□ 1.75
SFTPA1Q8IWL2 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC26■■□□□ 1.75
SFTPA1Q8IWL2 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC26■■□□□ 1.75
SFTPA1Q8IWL2 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC26■■□□□ 1.75
SFTPA1Q8IWL2 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC25.99■■□□□ 1.75
SFTPA1Q8IWL2 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
SFTPA1Q8IWL2 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC25.99■■□□□ 1.75
SFTPA1Q8IWL2 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC25.99■■□□□ 1.75
SFTPA1Q8IWL2 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
SFTPA1Q8IWL2 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
SFTPA1Q8IWL2 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
SFTPA1Q8IWL2 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
SFTPA1Q8IWL2 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC25.96■■□□□ 1.75
SFTPA1Q8IWL2 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC25.96■■□□□ 1.75
SFTPA1Q8IWL2 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC25.95■■□□□ 1.74
SFTPA1Q8IWL2 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC25.95■■□□□ 1.74
SFTPA1Q8IWL2 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC25.95■■□□□ 1.74
SFTPA1Q8IWL2 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC25.95■■□□□ 1.74
SFTPA1Q8IWL2 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC25.95■■□□□ 1.74
SFTPA1Q8IWL2 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC25.95■■□□□ 1.74
SFTPA1Q8IWL2 NTF6A-201ENST00000591175 560 ntBASIC25.94■■□□□ 1.74
SFTPA1Q8IWL2 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC25.94■■□□□ 1.74
SFTPA1Q8IWL2 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
SFTPA1Q8IWL2 AC100797.4-201ENST00000631653 1827 ntBASIC25.93■■□□□ 1.74
SFTPA1Q8IWL2 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
SFTPA1Q8IWL2 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC25.92■■□□□ 1.74
SFTPA1Q8IWL2 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC25.92■■□□□ 1.74
SFTPA1Q8IWL2 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC25.92■■□□□ 1.74
SFTPA1Q8IWL2 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
SFTPA1Q8IWL2 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
SFTPA1Q8IWL2 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC25.91■■□□□ 1.74
SFTPA1Q8IWL2 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC25.91■■□□□ 1.74
SFTPA1Q8IWL2 MED25-210ENST00000612854 801 ntTSL 5 BASIC25.91■■□□□ 1.74
SFTPA1Q8IWL2 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
SFTPA1Q8IWL2 MED25-214ENST00000622402 642 ntTSL 5 BASIC25.91■■□□□ 1.74
SFTPA1Q8IWL2 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
SFTPA1Q8IWL2 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
SFTPA1Q8IWL2 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC25.9■■□□□ 1.74
SFTPA1Q8IWL2 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC25.9■■□□□ 1.74
SFTPA1Q8IWL2 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC25.9■■□□□ 1.74
SFTPA1Q8IWL2 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC25.9■■□□□ 1.74
SFTPA1Q8IWL2 HES4-202ENST00000428771 1040 ntTSL 2 BASIC25.89■■□□□ 1.74
SFTPA1Q8IWL2 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC25.89■■□□□ 1.74
SFTPA1Q8IWL2 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC25.89■■□□□ 1.74
SFTPA1Q8IWL2 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC25.88■■□□□ 1.73
SFTPA1Q8IWL2 U85056.1-201ENST00000616429 682 ntBASIC25.88■■□□□ 1.73
SFTPA1Q8IWL2 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
SFTPA1Q8IWL2 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
SFTPA1Q8IWL2 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC25.86■■□□□ 1.73
SFTPA1Q8IWL2 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
SFTPA1Q8IWL2 AC092296.2-201ENST00000589470 999 ntBASIC25.86■■□□□ 1.73
SFTPA1Q8IWL2 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
SFTPA1Q8IWL2 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC25.85■■□□□ 1.73
SFTPA1Q8IWL2 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC25.85■■□□□ 1.73
SFTPA1Q8IWL2 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC25.85■■□□□ 1.73
SFTPA1Q8IWL2 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
SFTPA1Q8IWL2 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
SFTPA1Q8IWL2 HYI-213ENST00000583037 1322 ntTSL 5 BASIC25.84■■□□□ 1.73
SFTPA1Q8IWL2 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC25.83■■□□□ 1.73
SFTPA1Q8IWL2 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC25.83■■□□□ 1.73
SFTPA1Q8IWL2 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC25.82■■□□□ 1.72
SFTPA1Q8IWL2 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
SFTPA1Q8IWL2 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
SFTPA1Q8IWL2 AC012354.3-201ENST00000623734 483 ntBASIC25.81■■□□□ 1.72
SFTPA1Q8IWL2 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC25.81■■□□□ 1.72
SFTPA1Q8IWL2 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC25.81■■□□□ 1.72
SFTPA1Q8IWL2 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
SFTPA1Q8IWL2 AP004833.2-201ENST00000532228 1454 ntBASIC25.8■■□□□ 1.72
SFTPA1Q8IWL2 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
SFTPA1Q8IWL2 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC25.8■■□□□ 1.72
SFTPA1Q8IWL2 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC25.8■■□□□ 1.72
Retrieved 100 of 98,524 protein–RNA pairs in 11.5 ms