Protein–RNA interactions for Protein: Q86XK3

SFR1, Swi5-dependent recombination DNA repair protein 1 homolog, humanhuman

Predictions only

Length 245 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFR1Q86XK3 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC28.18■■■□□ 2.1
SFR1Q86XK3 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
SFR1Q86XK3 PROC-203ENST00000409048 1586 ntTSL 5 BASIC28.17■■■□□ 2.1
SFR1Q86XK3 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
SFR1Q86XK3 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
SFR1Q86XK3 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC28.16■■■□□ 2.1
SFR1Q86XK3 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC28.16■■■□□ 2.1
SFR1Q86XK3 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC28.15■■■□□ 2.1
SFR1Q86XK3 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC28.14■■■□□ 2.09
SFR1Q86XK3 AP002414.2-202ENST00000590929 1450 ntBASIC28.14■■■□□ 2.09
SFR1Q86XK3 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.09
SFR1Q86XK3 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
SFR1Q86XK3 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
SFR1Q86XK3 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC28.13■■■□□ 2.09
SFR1Q86XK3 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC28.13■■■□□ 2.09
SFR1Q86XK3 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
SFR1Q86XK3 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
SFR1Q86XK3 DUX4L11-201ENST00000611504 1267 ntBASIC28.12■■■□□ 2.09
SFR1Q86XK3 DUX4L12-201ENST00000614593 1267 ntBASIC28.12■■■□□ 2.09
SFR1Q86XK3 DUX4L14-201ENST00000621227 1267 ntBASIC28.12■■■□□ 2.09
SFR1Q86XK3 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC28.12■■■□□ 2.09
SFR1Q86XK3 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
SFR1Q86XK3 CHML-204ENST00000638121 920 ntTSL 2 BASIC28.11■■■□□ 2.09
SFR1Q86XK3 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC28.11■■■□□ 2.09
SFR1Q86XK3 AC110285.7-201ENST00000624417 1536 ntBASIC28.11■■■□□ 2.09
SFR1Q86XK3 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC28.1■■■□□ 2.09
SFR1Q86XK3 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
SFR1Q86XK3 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC28.08■■■□□ 2.08
SFR1Q86XK3 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
SFR1Q86XK3 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
SFR1Q86XK3 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC28.07■■■□□ 2.08
SFR1Q86XK3 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
SFR1Q86XK3 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
SFR1Q86XK3 DUX4L13-201ENST00000554103 1267 ntBASIC28.06■■■□□ 2.08
SFR1Q86XK3 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC28.06■■■□□ 2.08
SFR1Q86XK3 DUX4L15-201ENST00000611059 1267 ntBASIC28.06■■■□□ 2.08
SFR1Q86XK3 DUX4L23-201ENST00000615195 1269 ntBASIC28.06■■■□□ 2.08
SFR1Q86XK3 DUX4L24-201ENST00000617576 1269 ntBASIC28.06■■■□□ 2.08
SFR1Q86XK3 DUX4L22-201ENST00000618238 1269 ntBASIC28.06■■■□□ 2.08
SFR1Q86XK3 DUX4L20-201ENST00000619712 1269 ntBASIC28.06■■■□□ 2.08
SFR1Q86XK3 DUX4L21-201ENST00000622058 1269 ntBASIC28.06■■■□□ 2.08
SFR1Q86XK3 DUX4L10-201ENST00000622460 1267 ntBASIC28.06■■■□□ 2.08
SFR1Q86XK3 DUX4L25-201ENST00000624915 1269 ntBASIC28.06■■■□□ 2.08
SFR1Q86XK3 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC28.06■■■□□ 2.08
SFR1Q86XK3 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC28.06■■■□□ 2.08
SFR1Q86XK3 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC28.05■■■□□ 2.08
SFR1Q86XK3 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC28.05■■■□□ 2.08
SFR1Q86XK3 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC28.05■■■□□ 2.08
SFR1Q86XK3 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC28.05■■■□□ 2.08
SFR1Q86XK3 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC28.05■■■□□ 2.08
SFR1Q86XK3 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC28.04■■■□□ 2.08
SFR1Q86XK3 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC28.04■■■□□ 2.08
SFR1Q86XK3 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC28.04■■■□□ 2.08
SFR1Q86XK3 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC28.04■■■□□ 2.08
SFR1Q86XK3 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC28.04■■■□□ 2.08
SFR1Q86XK3 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC28.03■■■□□ 2.08
SFR1Q86XK3 PEX7-203ENST00000541292 945 ntTSL 5 BASIC28.03■■■□□ 2.08
SFR1Q86XK3 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC28.03■■■□□ 2.08
SFR1Q86XK3 RNF166-209ENST00000567844 633 ntTSL 5 BASIC28.03■■■□□ 2.08
SFR1Q86XK3 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC28.03■■■□□ 2.08
SFR1Q86XK3 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC28.02■■■□□ 2.08
SFR1Q86XK3 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC28.02■■■□□ 2.08
SFR1Q86XK3 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC28.02■■■□□ 2.08
SFR1Q86XK3 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC28.02■■■□□ 2.08
SFR1Q86XK3 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC28.02■■■□□ 2.08
SFR1Q86XK3 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC28.01■■■□□ 2.07
SFR1Q86XK3 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC28.01■■■□□ 2.07
SFR1Q86XK3 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC28.01■■■□□ 2.07
SFR1Q86XK3 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC28.01■■■□□ 2.07
SFR1Q86XK3 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC28.01■■■□□ 2.07
SFR1Q86XK3 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC28.01■■■□□ 2.07
SFR1Q86XK3 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC28■■■□□ 2.07
SFR1Q86XK3 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC28■■■□□ 2.07
SFR1Q86XK3 MIR7108-201ENST00000614319 87 ntBASIC28■■■□□ 2.07
SFR1Q86XK3 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC28■■■□□ 2.07
SFR1Q86XK3 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC27.99■■■□□ 2.07
SFR1Q86XK3 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC27.99■■■□□ 2.07
SFR1Q86XK3 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC27.99■■■□□ 2.07
SFR1Q86XK3 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC27.98■■■□□ 2.07
SFR1Q86XK3 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC27.98■■■□□ 2.07
SFR1Q86XK3 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC27.98■■■□□ 2.07
SFR1Q86XK3 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC27.98■■■□□ 2.07
SFR1Q86XK3 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC27.97■■■□□ 2.07
SFR1Q86XK3 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC27.97■■■□□ 2.07
SFR1Q86XK3 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC27.96■■■□□ 2.07
SFR1Q86XK3 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC27.96■■■□□ 2.07
SFR1Q86XK3 CR559946.2-201ENST00000623684 991 ntBASIC27.96■■■□□ 2.07
SFR1Q86XK3 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC27.96■■■□□ 2.07
SFR1Q86XK3 CHST11-202ENST00000546689 756 ntTSL 2 BASIC27.95■■■□□ 2.06
SFR1Q86XK3 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC27.95■■■□□ 2.06
SFR1Q86XK3 LINC01003-201ENST00000564834 1764 ntBASIC27.95■■■□□ 2.06
SFR1Q86XK3 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC27.95■■■□□ 2.06
SFR1Q86XK3 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC27.95■■■□□ 2.06
SFR1Q86XK3 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC27.95■■■□□ 2.06
SFR1Q86XK3 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC27.94■■■□□ 2.06
SFR1Q86XK3 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC27.94■■■□□ 2.06
SFR1Q86XK3 AC018358.1-201ENST00000631079 1402 ntBASIC27.94■■■□□ 2.06
SFR1Q86XK3 BX255925.1-201ENST00000566954 1854 ntBASIC27.93■■■□□ 2.06
SFR1Q86XK3 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC27.93■■■□□ 2.06
SFR1Q86XK3 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC27.93■■■□□ 2.06
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms