Protein–RNA interactions for Protein: Q6ZW05

PTCHD4, Patched domain-containing protein 4, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4Q6ZW05 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC23.21■■□□□ 1.31
PTCHD4Q6ZW05 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC23.21■■□□□ 1.31
PTCHD4Q6ZW05 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC23.2■■□□□ 1.31
PTCHD4Q6ZW05 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
PTCHD4Q6ZW05 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
PTCHD4Q6ZW05 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
PTCHD4Q6ZW05 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC23.2■■□□□ 1.3
PTCHD4Q6ZW05 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC23.2■■□□□ 1.3
PTCHD4Q6ZW05 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC23.19■■□□□ 1.3
PTCHD4Q6ZW05 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC23.19■■□□□ 1.3
PTCHD4Q6ZW05 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC23.19■■□□□ 1.3
PTCHD4Q6ZW05 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC23.19■■□□□ 1.3
PTCHD4Q6ZW05 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
PTCHD4Q6ZW05 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC23.18■■□□□ 1.3
PTCHD4Q6ZW05 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC23.18■■□□□ 1.3
PTCHD4Q6ZW05 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
PTCHD4Q6ZW05 PKM-203ENST00000389093 2279 ntTSL 5 BASIC23.17■■□□□ 1.3
PTCHD4Q6ZW05 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
PTCHD4Q6ZW05 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC23.17■■□□□ 1.3
PTCHD4Q6ZW05 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC23.17■■□□□ 1.3
PTCHD4Q6ZW05 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC23.16■■□□□ 1.3
PTCHD4Q6ZW05 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
PTCHD4Q6ZW05 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC23.16■■□□□ 1.3
PTCHD4Q6ZW05 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
PTCHD4Q6ZW05 AC127502.1-201ENST00000399971 1502 ntBASIC23.15■■□□□ 1.3
PTCHD4Q6ZW05 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC23.15■■□□□ 1.3
PTCHD4Q6ZW05 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC23.15■■□□□ 1.3
PTCHD4Q6ZW05 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC23.15■■□□□ 1.3
PTCHD4Q6ZW05 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC23.15■■□□□ 1.3
PTCHD4Q6ZW05 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC23.15■■□□□ 1.3
PTCHD4Q6ZW05 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
PTCHD4Q6ZW05 MIR762-201ENST00000390236 83 ntBASIC23.14■■□□□ 1.29
PTCHD4Q6ZW05 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC23.14■■□□□ 1.29
PTCHD4Q6ZW05 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
PTCHD4Q6ZW05 AL449106.1-201ENST00000608517 1980 ntBASIC23.13■■□□□ 1.29
PTCHD4Q6ZW05 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC23.13■■□□□ 1.29
PTCHD4Q6ZW05 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
PTCHD4Q6ZW05 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC23.13■■□□□ 1.29
PTCHD4Q6ZW05 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC23.13■■□□□ 1.29
PTCHD4Q6ZW05 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
PTCHD4Q6ZW05 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC23.12■■□□□ 1.29
PTCHD4Q6ZW05 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC23.11■■□□□ 1.29
PTCHD4Q6ZW05 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
PTCHD4Q6ZW05 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
PTCHD4Q6ZW05 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
PTCHD4Q6ZW05 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC23.1■■□□□ 1.29
PTCHD4Q6ZW05 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC23.1■■□□□ 1.29
PTCHD4Q6ZW05 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC23.1■■□□□ 1.29
PTCHD4Q6ZW05 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC23.1■■□□□ 1.29
PTCHD4Q6ZW05 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC23.09■■□□□ 1.29
PTCHD4Q6ZW05 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC23.09■■□□□ 1.29
PTCHD4Q6ZW05 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC23.09■■□□□ 1.29
PTCHD4Q6ZW05 SUZ12P1-203ENST00000578195 985 ntBASIC23.09■■□□□ 1.29
PTCHD4Q6ZW05 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC23.08■■□□□ 1.29
PTCHD4Q6ZW05 AC100797.4-201ENST00000631653 1827 ntBASIC23.08■■□□□ 1.29
PTCHD4Q6ZW05 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC23.08■■□□□ 1.29
PTCHD4Q6ZW05 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC23.08■■□□□ 1.29
PTCHD4Q6ZW05 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC23.08■■□□□ 1.28
PTCHD4Q6ZW05 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC23.07■■□□□ 1.28
PTCHD4Q6ZW05 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC23.07■■□□□ 1.28
PTCHD4Q6ZW05 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
PTCHD4Q6ZW05 CHML-205ENST00000638160 705 ntTSL 3 BASIC23.07■■□□□ 1.28
PTCHD4Q6ZW05 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC23.07■■□□□ 1.28
PTCHD4Q6ZW05 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
PTCHD4Q6ZW05 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC23.06■■□□□ 1.28
PTCHD4Q6ZW05 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC23.06■■□□□ 1.28
PTCHD4Q6ZW05 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
PTCHD4Q6ZW05 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC23.06■■□□□ 1.28
PTCHD4Q6ZW05 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC23.05■■□□□ 1.28
PTCHD4Q6ZW05 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
PTCHD4Q6ZW05 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
PTCHD4Q6ZW05 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC23.03■■□□□ 1.28
PTCHD4Q6ZW05 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC23.03■■□□□ 1.28
PTCHD4Q6ZW05 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC23.03■■□□□ 1.28
PTCHD4Q6ZW05 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
PTCHD4Q6ZW05 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC23.02■■□□□ 1.28
PTCHD4Q6ZW05 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
PTCHD4Q6ZW05 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
PTCHD4Q6ZW05 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
PTCHD4Q6ZW05 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
PTCHD4Q6ZW05 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
PTCHD4Q6ZW05 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC23.02■■□□□ 1.28
PTCHD4Q6ZW05 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC23.02■■□□□ 1.28
PTCHD4Q6ZW05 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
PTCHD4Q6ZW05 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
PTCHD4Q6ZW05 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
PTCHD4Q6ZW05 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC23.01■■□□□ 1.27
PTCHD4Q6ZW05 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
PTCHD4Q6ZW05 RPS2-209ENST00000529806 993 ntTSL 3 BASIC23■■□□□ 1.27
PTCHD4Q6ZW05 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
PTCHD4Q6ZW05 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC23■■□□□ 1.27
PTCHD4Q6ZW05 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
PTCHD4Q6ZW05 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC22.99■■□□□ 1.27
PTCHD4Q6ZW05 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC22.99■■□□□ 1.27
PTCHD4Q6ZW05 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
PTCHD4Q6ZW05 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
PTCHD4Q6ZW05 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
PTCHD4Q6ZW05 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC22.98■■□□□ 1.27
PTCHD4Q6ZW05 HNRNPLP2-201ENST00000568980 1570 ntBASIC22.98■■□□□ 1.27
PTCHD4Q6ZW05 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Retrieved 100 of 98,524 protein–RNA pairs in 13.6 ms