Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC17.5■□□□□ 0.39
VPS13DQ5THJ4 GUK1-208ENST00000366728 842 ntTSL 2 BASIC17.5■□□□□ 0.39
VPS13DQ5THJ4 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
VPS13DQ5THJ4 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
VPS13DQ5THJ4 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC17.5■□□□□ 0.39
VPS13DQ5THJ4 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
VPS13DQ5THJ4 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
VPS13DQ5THJ4 AL035685.1-201ENST00000636663 812 ntBASIC17.5■□□□□ 0.39
VPS13DQ5THJ4 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC17.49■□□□□ 0.39
VPS13DQ5THJ4 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
VPS13DQ5THJ4 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC17.49■□□□□ 0.39
VPS13DQ5THJ4 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
VPS13DQ5THJ4 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
VPS13DQ5THJ4 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC17.49■□□□□ 0.39
VPS13DQ5THJ4 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
VPS13DQ5THJ4 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
VPS13DQ5THJ4 ATP5G2P3-201ENST00000429083 425 ntBASIC17.48■□□□□ 0.39
VPS13DQ5THJ4 CHST11-203ENST00000547956 936 ntTSL 2 BASIC17.48■□□□□ 0.39
VPS13DQ5THJ4 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC17.48■□□□□ 0.39
VPS13DQ5THJ4 AL451085.2-201ENST00000605085 799 ntBASIC17.48■□□□□ 0.39
VPS13DQ5THJ4 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC17.48■□□□□ 0.39
VPS13DQ5THJ4 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC17.48■□□□□ 0.39
VPS13DQ5THJ4 RARRES2P1-201ENST00000474487 481 ntBASIC17.48■□□□□ 0.39
VPS13DQ5THJ4 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
VPS13DQ5THJ4 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
VPS13DQ5THJ4 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC17.47■□□□□ 0.39
VPS13DQ5THJ4 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
VPS13DQ5THJ4 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
VPS13DQ5THJ4 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
VPS13DQ5THJ4 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
VPS13DQ5THJ4 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC17.46■□□□□ 0.39
VPS13DQ5THJ4 HES4-202ENST00000428771 1040 ntTSL 2 BASIC17.46■□□□□ 0.39
VPS13DQ5THJ4 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
VPS13DQ5THJ4 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.38
VPS13DQ5THJ4 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
VPS13DQ5THJ4 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
VPS13DQ5THJ4 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
VPS13DQ5THJ4 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC17.44■□□□□ 0.38
VPS13DQ5THJ4 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
VPS13DQ5THJ4 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
VPS13DQ5THJ4 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
VPS13DQ5THJ4 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
VPS13DQ5THJ4 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
VPS13DQ5THJ4 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
VPS13DQ5THJ4 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC17.43■□□□□ 0.38
VPS13DQ5THJ4 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
VPS13DQ5THJ4 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC17.43■□□□□ 0.38
VPS13DQ5THJ4 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
VPS13DQ5THJ4 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
VPS13DQ5THJ4 MOB2-207ENST00000614710 705 ntTSL 5 BASIC17.43■□□□□ 0.38
VPS13DQ5THJ4 MIR219A2-201ENST00000608502 1504 ntBASIC17.42■□□□□ 0.38
VPS13DQ5THJ4 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
VPS13DQ5THJ4 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
VPS13DQ5THJ4 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
VPS13DQ5THJ4 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
VPS13DQ5THJ4 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
VPS13DQ5THJ4 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
VPS13DQ5THJ4 AC129492.7-201ENST00000622992 756 ntBASIC17.41■□□□□ 0.38
VPS13DQ5THJ4 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
VPS13DQ5THJ4 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC17.4■□□□□ 0.38
VPS13DQ5THJ4 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
VPS13DQ5THJ4 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC17.39■□□□□ 0.37
VPS13DQ5THJ4 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
VPS13DQ5THJ4 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC17.39■□□□□ 0.37
VPS13DQ5THJ4 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
VPS13DQ5THJ4 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
VPS13DQ5THJ4 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
VPS13DQ5THJ4 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
VPS13DQ5THJ4 AL592293.1-201ENST00000502889 1188 ntBASIC17.37■□□□□ 0.37
VPS13DQ5THJ4 AL592295.1-201ENST00000400984 884 ntBASIC17.37■□□□□ 0.37
VPS13DQ5THJ4 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC17.37■□□□□ 0.37
VPS13DQ5THJ4 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
VPS13DQ5THJ4 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
VPS13DQ5THJ4 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
VPS13DQ5THJ4 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
VPS13DQ5THJ4 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC17.36■□□□□ 0.37
VPS13DQ5THJ4 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
VPS13DQ5THJ4 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
VPS13DQ5THJ4 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
VPS13DQ5THJ4 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
VPS13DQ5THJ4 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
VPS13DQ5THJ4 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC17.35■□□□□ 0.37
VPS13DQ5THJ4 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
VPS13DQ5THJ4 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
VPS13DQ5THJ4 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
VPS13DQ5THJ4 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
VPS13DQ5THJ4 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
VPS13DQ5THJ4 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
VPS13DQ5THJ4 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
VPS13DQ5THJ4 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
VPS13DQ5THJ4 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
VPS13DQ5THJ4 MEST-211ENST00000437945 1455 ntTSL 5 BASIC17.33■□□□□ 0.36
VPS13DQ5THJ4 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC17.33■□□□□ 0.36
VPS13DQ5THJ4 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
VPS13DQ5THJ4 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
VPS13DQ5THJ4 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC17.33■□□□□ 0.36
VPS13DQ5THJ4 AC025884.2-201ENST00000553429 711 ntBASIC17.33■□□□□ 0.36
VPS13DQ5THJ4 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
VPS13DQ5THJ4 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
VPS13DQ5THJ4 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms