Protein–RNA interactions for Protein: Q2VWP7

PRTG, Protogenin, humanhuman

Predictions only

Length 1,150 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRTGQ2VWP7 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC24.21■■□□□ 1.47
PRTGQ2VWP7 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
PRTGQ2VWP7 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC24.21■■□□□ 1.47
PRTGQ2VWP7 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
PRTGQ2VWP7 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC24.2■■□□□ 1.47
PRTGQ2VWP7 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC24.2■■□□□ 1.47
PRTGQ2VWP7 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
PRTGQ2VWP7 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC24.2■■□□□ 1.46
PRTGQ2VWP7 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
PRTGQ2VWP7 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC24.2■■□□□ 1.46
PRTGQ2VWP7 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
PRTGQ2VWP7 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC24.19■■□□□ 1.46
PRTGQ2VWP7 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
PRTGQ2VWP7 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
PRTGQ2VWP7 AC008813.1-201ENST00000536597 885 ntBASIC24.19■■□□□ 1.46
PRTGQ2VWP7 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC24.19■■□□□ 1.46
PRTGQ2VWP7 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
PRTGQ2VWP7 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC24.19■■□□□ 1.46
PRTGQ2VWP7 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC24.18■■□□□ 1.46
PRTGQ2VWP7 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
PRTGQ2VWP7 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC24.18■■□□□ 1.46
PRTGQ2VWP7 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC24.18■■□□□ 1.46
PRTGQ2VWP7 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
PRTGQ2VWP7 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
PRTGQ2VWP7 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC24.17■■□□□ 1.46
PRTGQ2VWP7 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC24.17■■□□□ 1.46
PRTGQ2VWP7 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC24.17■■□□□ 1.46
PRTGQ2VWP7 RPS2-210ENST00000530225 765 ntTSL 2 BASIC24.17■■□□□ 1.46
PRTGQ2VWP7 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC24.16■■□□□ 1.46
PRTGQ2VWP7 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC24.16■■□□□ 1.46
PRTGQ2VWP7 AC139426.1-201ENST00000568218 2529 ntBASIC24.16■■□□□ 1.46
PRTGQ2VWP7 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
PRTGQ2VWP7 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC24.15■■□□□ 1.46
PRTGQ2VWP7 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC24.15■■□□□ 1.46
PRTGQ2VWP7 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC24.15■■□□□ 1.46
PRTGQ2VWP7 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
PRTGQ2VWP7 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC24.14■■□□□ 1.46
PRTGQ2VWP7 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.46
PRTGQ2VWP7 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC24.14■■□□□ 1.45
PRTGQ2VWP7 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC24.14■■□□□ 1.45
PRTGQ2VWP7 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC24.14■■□□□ 1.45
PRTGQ2VWP7 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
PRTGQ2VWP7 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
PRTGQ2VWP7 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
PRTGQ2VWP7 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC24.13■■□□□ 1.45
PRTGQ2VWP7 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC24.12■■□□□ 1.45
PRTGQ2VWP7 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC24.11■■□□□ 1.45
PRTGQ2VWP7 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC24.11■■□□□ 1.45
PRTGQ2VWP7 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
PRTGQ2VWP7 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
PRTGQ2VWP7 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC24.1■■□□□ 1.45
PRTGQ2VWP7 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC24.1■■□□□ 1.45
PRTGQ2VWP7 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC24.1■■□□□ 1.45
PRTGQ2VWP7 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC24.1■■□□□ 1.45
PRTGQ2VWP7 AP002414.2-202ENST00000590929 1450 ntBASIC24.1■■□□□ 1.45
PRTGQ2VWP7 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC24.08■■□□□ 1.45
PRTGQ2VWP7 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
PRTGQ2VWP7 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC24.08■■□□□ 1.45
PRTGQ2VWP7 AC148477.6-201ENST00000623746 465 ntBASIC24.08■■□□□ 1.45
PRTGQ2VWP7 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.44
PRTGQ2VWP7 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.44
PRTGQ2VWP7 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC24.07■■□□□ 1.44
PRTGQ2VWP7 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
PRTGQ2VWP7 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC24.06■■□□□ 1.44
PRTGQ2VWP7 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
PRTGQ2VWP7 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
PRTGQ2VWP7 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
PRTGQ2VWP7 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
PRTGQ2VWP7 CHST11-203ENST00000547956 936 ntTSL 2 BASIC24.06■■□□□ 1.44
PRTGQ2VWP7 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC24.06■■□□□ 1.44
PRTGQ2VWP7 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
PRTGQ2VWP7 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
PRTGQ2VWP7 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC24.06■■□□□ 1.44
PRTGQ2VWP7 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC24.06■■□□□ 1.44
PRTGQ2VWP7 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC24.06■■□□□ 1.44
PRTGQ2VWP7 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC24.06■■□□□ 1.44
PRTGQ2VWP7 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
PRTGQ2VWP7 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
PRTGQ2VWP7 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
PRTGQ2VWP7 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC24.04■■□□□ 1.44
PRTGQ2VWP7 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC24.04■■□□□ 1.44
PRTGQ2VWP7 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC24.04■■□□□ 1.44
PRTGQ2VWP7 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
PRTGQ2VWP7 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
PRTGQ2VWP7 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC24.04■■□□□ 1.44
PRTGQ2VWP7 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC24.03■■□□□ 1.44
PRTGQ2VWP7 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC24.03■■□□□ 1.44
PRTGQ2VWP7 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC24.03■■□□□ 1.44
PRTGQ2VWP7 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC24.03■■□□□ 1.44
PRTGQ2VWP7 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
PRTGQ2VWP7 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
PRTGQ2VWP7 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
PRTGQ2VWP7 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
PRTGQ2VWP7 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC24.02■■□□□ 1.44
PRTGQ2VWP7 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
PRTGQ2VWP7 SRP68-213ENST00000629930 165 ntTSL 5 BASIC24.02■■□□□ 1.44
PRTGQ2VWP7 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
PRTGQ2VWP7 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC24.01■■□□□ 1.43
PRTGQ2VWP7 PROC-203ENST00000409048 1586 ntTSL 5 BASIC24.01■■□□□ 1.43
PRTGQ2VWP7 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms