Protein–RNA interactions for Protein: Q2VWP7

PRTG, Protogenin, humanhuman

Predictions only

Length 1,150 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRTGQ2VWP7 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC24.21■■□□□ 1.47
PRTGQ2VWP7 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
PRTGQ2VWP7 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC24.21■■□□□ 1.47
PRTGQ2VWP7 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
PRTGQ2VWP7 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC24.2■■□□□ 1.47
PRTGQ2VWP7 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC24.2■■□□□ 1.47
PRTGQ2VWP7 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
PRTGQ2VWP7 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC24.2■■□□□ 1.46
PRTGQ2VWP7 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
PRTGQ2VWP7 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC24.2■■□□□ 1.46
PRTGQ2VWP7 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
PRTGQ2VWP7 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC24.19■■□□□ 1.46
PRTGQ2VWP7 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
PRTGQ2VWP7 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
PRTGQ2VWP7 AC008813.1-201ENST00000536597 885 ntBASIC24.19■■□□□ 1.46
PRTGQ2VWP7 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC24.19■■□□□ 1.46
PRTGQ2VWP7 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
PRTGQ2VWP7 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC24.19■■□□□ 1.46
PRTGQ2VWP7 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC24.18■■□□□ 1.46
PRTGQ2VWP7 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
PRTGQ2VWP7 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC24.18■■□□□ 1.46
PRTGQ2VWP7 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC24.18■■□□□ 1.46
PRTGQ2VWP7 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
PRTGQ2VWP7 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
PRTGQ2VWP7 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC24.17■■□□□ 1.46
PRTGQ2VWP7 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC24.17■■□□□ 1.46
PRTGQ2VWP7 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC24.17■■□□□ 1.46
PRTGQ2VWP7 RPS2-210ENST00000530225 765 ntTSL 2 BASIC24.17■■□□□ 1.46
PRTGQ2VWP7 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC24.16■■□□□ 1.46
PRTGQ2VWP7 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC24.16■■□□□ 1.46
PRTGQ2VWP7 AC139426.1-201ENST00000568218 2529 ntBASIC24.16■■□□□ 1.46
PRTGQ2VWP7 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
PRTGQ2VWP7 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC24.15■■□□□ 1.46
PRTGQ2VWP7 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC24.15■■□□□ 1.46
PRTGQ2VWP7 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC24.15■■□□□ 1.46
PRTGQ2VWP7 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
PRTGQ2VWP7 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC24.14■■□□□ 1.46
PRTGQ2VWP7 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.46
PRTGQ2VWP7 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC24.14■■□□□ 1.45
PRTGQ2VWP7 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC24.14■■□□□ 1.45
PRTGQ2VWP7 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC24.14■■□□□ 1.45
PRTGQ2VWP7 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
PRTGQ2VWP7 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
PRTGQ2VWP7 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
PRTGQ2VWP7 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC24.13■■□□□ 1.45
PRTGQ2VWP7 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC24.12■■□□□ 1.45
PRTGQ2VWP7 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC24.11■■□□□ 1.45
PRTGQ2VWP7 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC24.11■■□□□ 1.45
PRTGQ2VWP7 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
PRTGQ2VWP7 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
PRTGQ2VWP7 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC24.1■■□□□ 1.45
PRTGQ2VWP7 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC24.1■■□□□ 1.45
PRTGQ2VWP7 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC24.1■■□□□ 1.45
PRTGQ2VWP7 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC24.1■■□□□ 1.45
PRTGQ2VWP7 AP002414.2-202ENST00000590929 1450 ntBASIC24.1■■□□□ 1.45
PRTGQ2VWP7 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC24.08■■□□□ 1.45
PRTGQ2VWP7 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
PRTGQ2VWP7 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC24.08■■□□□ 1.45
PRTGQ2VWP7 AC148477.6-201ENST00000623746 465 ntBASIC24.08■■□□□ 1.45
PRTGQ2VWP7 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.44
PRTGQ2VWP7 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.44
PRTGQ2VWP7 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC24.07■■□□□ 1.44
PRTGQ2VWP7 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
PRTGQ2VWP7 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC24.06■■□□□ 1.44
PRTGQ2VWP7 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
PRTGQ2VWP7 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
PRTGQ2VWP7 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
PRTGQ2VWP7 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
PRTGQ2VWP7 CHST11-203ENST00000547956 936 ntTSL 2 BASIC24.06■■□□□ 1.44
PRTGQ2VWP7 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC24.06■■□□□ 1.44
PRTGQ2VWP7 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
PRTGQ2VWP7 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
PRTGQ2VWP7 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC24.06■■□□□ 1.44
PRTGQ2VWP7 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC24.06■■□□□ 1.44
PRTGQ2VWP7 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC24.06■■□□□ 1.44
PRTGQ2VWP7 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC24.06■■□□□ 1.44
PRTGQ2VWP7 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
PRTGQ2VWP7 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
PRTGQ2VWP7 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
PRTGQ2VWP7 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC24.04■■□□□ 1.44
PRTGQ2VWP7 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC24.04■■□□□ 1.44
PRTGQ2VWP7 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC24.04■■□□□ 1.44
PRTGQ2VWP7 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
PRTGQ2VWP7 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
PRTGQ2VWP7 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC24.04■■□□□ 1.44
PRTGQ2VWP7 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC24.03■■□□□ 1.44
PRTGQ2VWP7 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC24.03■■□□□ 1.44
PRTGQ2VWP7 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC24.03■■□□□ 1.44
PRTGQ2VWP7 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC24.03■■□□□ 1.44
PRTGQ2VWP7 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
PRTGQ2VWP7 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
PRTGQ2VWP7 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
PRTGQ2VWP7 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
PRTGQ2VWP7 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC24.02■■□□□ 1.44
PRTGQ2VWP7 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
PRTGQ2VWP7 SRP68-213ENST00000629930 165 ntTSL 5 BASIC24.02■■□□□ 1.44
PRTGQ2VWP7 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
PRTGQ2VWP7 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC24.01■■□□□ 1.43
PRTGQ2VWP7 PROC-203ENST00000409048 1586 ntTSL 5 BASIC24.01■■□□□ 1.43
PRTGQ2VWP7 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
Retrieved 100 of 98,524 protein–RNA pairs in 17.1 ms