Protein–RNA interactions for Protein: P78556

CCL20, C-C motif chemokine 20, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL20P78556 AC145676.1-201ENST00000514988 2004 ntBASIC20.07■□□□□ 0.8
CCL20P78556 AC010864.1-201ENST00000609407 1511 ntBASIC20.07■□□□□ 0.8
CCL20P78556 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC20.06■□□□□ 0.8
CCL20P78556 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
CCL20P78556 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CCL20P78556 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC20.05■□□□□ 0.8
CCL20P78556 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC20.05■□□□□ 0.8
CCL20P78556 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
CCL20P78556 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CCL20P78556 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CCL20P78556 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CCL20P78556 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CCL20P78556 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CCL20P78556 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CCL20P78556 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CCL20P78556 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC20.04■□□□□ 0.8
CCL20P78556 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CCL20P78556 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC20.04■□□□□ 0.8
CCL20P78556 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CCL20P78556 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC20.03■□□□□ 0.8
CCL20P78556 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC20.03■□□□□ 0.8
CCL20P78556 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
CCL20P78556 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CCL20P78556 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC20.02■□□□□ 0.8
CCL20P78556 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CCL20P78556 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
CCL20P78556 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
CCL20P78556 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CCL20P78556 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
CCL20P78556 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CCL20P78556 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CCL20P78556 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC20■□□□□ 0.79
CCL20P78556 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
CCL20P78556 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CCL20P78556 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
CCL20P78556 AP004833.2-201ENST00000532228 1454 ntBASIC19.99■□□□□ 0.79
CCL20P78556 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC19.98■□□□□ 0.79
CCL20P78556 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CCL20P78556 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CCL20P78556 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CCL20P78556 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CCL20P78556 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CCL20P78556 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CCL20P78556 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
CCL20P78556 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC19.97■□□□□ 0.79
CCL20P78556 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CCL20P78556 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CCL20P78556 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC19.96■□□□□ 0.79
CCL20P78556 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC19.96■□□□□ 0.79
CCL20P78556 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CCL20P78556 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
CCL20P78556 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC19.95■□□□□ 0.78
CCL20P78556 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC19.95■□□□□ 0.78
CCL20P78556 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC19.95■□□□□ 0.78
CCL20P78556 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
CCL20P78556 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC19.95■□□□□ 0.78
CCL20P78556 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CCL20P78556 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CCL20P78556 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC19.94■□□□□ 0.78
CCL20P78556 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CCL20P78556 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC19.94■□□□□ 0.78
CCL20P78556 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC19.94■□□□□ 0.78
CCL20P78556 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CCL20P78556 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC19.94■□□□□ 0.78
CCL20P78556 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
CCL20P78556 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
CCL20P78556 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CCL20P78556 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC19.93■□□□□ 0.78
CCL20P78556 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC19.93■□□□□ 0.78
CCL20P78556 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CCL20P78556 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
CCL20P78556 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
CCL20P78556 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CCL20P78556 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC19.92■□□□□ 0.78
CCL20P78556 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CCL20P78556 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC19.91■□□□□ 0.78
CCL20P78556 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
CCL20P78556 THRA-202ENST00000394121 2260 ntTSL 2 BASIC19.9■□□□□ 0.78
CCL20P78556 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
CCL20P78556 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CCL20P78556 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
CCL20P78556 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC19.9■□□□□ 0.78
CCL20P78556 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC19.9■□□□□ 0.78
CCL20P78556 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CCL20P78556 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CCL20P78556 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CCL20P78556 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CCL20P78556 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CCL20P78556 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CCL20P78556 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC19.88■□□□□ 0.77
CCL20P78556 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
CCL20P78556 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CCL20P78556 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CCL20P78556 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC19.87■□□□□ 0.77
CCL20P78556 EBPL-203ENST00000378270 579 ntTSL 2 BASIC19.87■□□□□ 0.77
CCL20P78556 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CCL20P78556 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
CCL20P78556 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CCL20P78556 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC19.86■□□□□ 0.77
CCL20P78556 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 11.6 ms