Protein–RNA interactions for Protein: P78539

SRPX, Sushi repeat-containing protein SRPX, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRPXP78539 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC20.84■□□□□ 0.93
SRPXP78539 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SRPXP78539 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
SRPXP78539 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
SRPXP78539 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
SRPXP78539 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
SRPXP78539 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
SRPXP78539 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
SRPXP78539 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
SRPXP78539 AP002414.2-202ENST00000590929 1450 ntBASIC20.82■□□□□ 0.92
SRPXP78539 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC20.82■□□□□ 0.92
SRPXP78539 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SRPXP78539 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC20.82■□□□□ 0.92
SRPXP78539 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
SRPXP78539 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SRPXP78539 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SRPXP78539 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
SRPXP78539 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SRPXP78539 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SRPXP78539 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SRPXP78539 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SRPXP78539 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
SRPXP78539 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC20.8■□□□□ 0.92
SRPXP78539 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SRPXP78539 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SRPXP78539 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SRPXP78539 AC100797.4-201ENST00000631653 1827 ntBASIC20.8■□□□□ 0.92
SRPXP78539 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
SRPXP78539 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SRPXP78539 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
SRPXP78539 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SRPXP78539 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SRPXP78539 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC20.79■□□□□ 0.92
SRPXP78539 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
SRPXP78539 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
SRPXP78539 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SRPXP78539 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
SRPXP78539 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SRPXP78539 AC091060.1-201ENST00000623524 1766 ntBASIC20.77■□□□□ 0.92
SRPXP78539 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SRPXP78539 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SRPXP78539 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
SRPXP78539 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC20.77■□□□□ 0.92
SRPXP78539 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC20.77■□□□□ 0.92
SRPXP78539 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
SRPXP78539 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SRPXP78539 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC20.77■□□□□ 0.91
SRPXP78539 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SRPXP78539 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SRPXP78539 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
SRPXP78539 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
SRPXP78539 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SRPXP78539 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SRPXP78539 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
SRPXP78539 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
SRPXP78539 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SRPXP78539 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SRPXP78539 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SRPXP78539 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
SRPXP78539 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC20.74■□□□□ 0.91
SRPXP78539 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SRPXP78539 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC20.73■□□□□ 0.91
SRPXP78539 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC20.73■□□□□ 0.91
SRPXP78539 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SRPXP78539 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
SRPXP78539 AC145676.1-201ENST00000514988 2004 ntBASIC20.73■□□□□ 0.91
SRPXP78539 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC20.72■□□□□ 0.91
SRPXP78539 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
SRPXP78539 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
SRPXP78539 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
SRPXP78539 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
SRPXP78539 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SRPXP78539 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC20.71■□□□□ 0.91
SRPXP78539 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SRPXP78539 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SRPXP78539 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC20.71■□□□□ 0.91
SRPXP78539 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC20.7■□□□□ 0.9
SRPXP78539 AC018358.1-201ENST00000631079 1402 ntBASIC20.7■□□□□ 0.9
SRPXP78539 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
SRPXP78539 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC20.69■□□□□ 0.9
SRPXP78539 DENR-202ENST00000455982 1052 ntTSL 5 BASIC20.69■□□□□ 0.9
SRPXP78539 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
SRPXP78539 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
SRPXP78539 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC20.68■□□□□ 0.9
SRPXP78539 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC20.68■□□□□ 0.9
SRPXP78539 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC20.68■□□□□ 0.9
SRPXP78539 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SRPXP78539 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SRPXP78539 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SRPXP78539 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SRPXP78539 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
SRPXP78539 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SRPXP78539 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
SRPXP78539 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC20.64■□□□□ 0.9
SRPXP78539 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
SRPXP78539 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
SRPXP78539 MEST-211ENST00000437945 1455 ntTSL 5 BASIC20.64■□□□□ 0.89
SRPXP78539 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC20.64■□□□□ 0.89
SRPXP78539 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SRPXP78539 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 15.1 ms