Protein–RNA interactions for Protein: P54821

PRRX1, Paired mesoderm homeobox protein 1, humanhuman

Predictions only

Length 245 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRRX1P54821 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
PRRX1P54821 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PRRX1P54821 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC20.78■□□□□ 0.92
PRRX1P54821 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
PRRX1P54821 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
PRRX1P54821 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
PRRX1P54821 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC20.77■□□□□ 0.92
PRRX1P54821 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC20.77■□□□□ 0.91
PRRX1P54821 SHF-206ENST00000560471 2499 ntTSL 5 BASIC20.77■□□□□ 0.91
PRRX1P54821 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC20.76■□□□□ 0.91
PRRX1P54821 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PRRX1P54821 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PRRX1P54821 DRD5P2-201ENST00000421395 2012 ntBASIC20.75■□□□□ 0.91
PRRX1P54821 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC20.75■□□□□ 0.91
PRRX1P54821 PROC-203ENST00000409048 1586 ntTSL 5 BASIC20.75■□□□□ 0.91
PRRX1P54821 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
PRRX1P54821 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
PRRX1P54821 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PRRX1P54821 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PRRX1P54821 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PRRX1P54821 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC20.73■□□□□ 0.91
PRRX1P54821 DUX4L11-201ENST00000611504 1267 ntBASIC20.73■□□□□ 0.91
PRRX1P54821 DUX4L12-201ENST00000614593 1267 ntBASIC20.73■□□□□ 0.91
PRRX1P54821 DUX4L14-201ENST00000621227 1267 ntBASIC20.73■□□□□ 0.91
PRRX1P54821 CHML-204ENST00000638121 920 ntTSL 2 BASIC20.73■□□□□ 0.91
PRRX1P54821 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PRRX1P54821 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
PRRX1P54821 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC20.72■□□□□ 0.91
PRRX1P54821 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PRRX1P54821 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC20.72■□□□□ 0.91
PRRX1P54821 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC20.72■□□□□ 0.91
PRRX1P54821 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC20.72■□□□□ 0.91
PRRX1P54821 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC20.72■□□□□ 0.91
PRRX1P54821 AP002414.2-202ENST00000590929 1450 ntBASIC20.72■□□□□ 0.91
PRRX1P54821 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PRRX1P54821 AC142086.6-201ENST00000621154 1765 ntBASIC20.72■□□□□ 0.91
PRRX1P54821 AC110285.7-201ENST00000624417 1536 ntBASIC20.71■□□□□ 0.91
PRRX1P54821 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
PRRX1P54821 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC20.71■□□□□ 0.91
PRRX1P54821 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC20.7■□□□□ 0.9
PRRX1P54821 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
PRRX1P54821 DUX4L13-201ENST00000554103 1267 ntBASIC20.7■□□□□ 0.9
PRRX1P54821 DUX4L15-201ENST00000611059 1267 ntBASIC20.7■□□□□ 0.9
PRRX1P54821 DUX4L23-201ENST00000615195 1269 ntBASIC20.7■□□□□ 0.9
PRRX1P54821 DUX4L24-201ENST00000617576 1269 ntBASIC20.7■□□□□ 0.9
PRRX1P54821 DUX4L22-201ENST00000618238 1269 ntBASIC20.7■□□□□ 0.9
PRRX1P54821 DUX4L20-201ENST00000619712 1269 ntBASIC20.7■□□□□ 0.9
PRRX1P54821 DUX4L21-201ENST00000622058 1269 ntBASIC20.7■□□□□ 0.9
PRRX1P54821 DUX4L10-201ENST00000622460 1267 ntBASIC20.7■□□□□ 0.9
PRRX1P54821 DUX4L25-201ENST00000624915 1269 ntBASIC20.7■□□□□ 0.9
PRRX1P54821 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PRRX1P54821 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
PRRX1P54821 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
PRRX1P54821 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC20.7■□□□□ 0.9
PRRX1P54821 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
PRRX1P54821 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
PRRX1P54821 AGPS-202ENST00000409888 815 ntTSL 4 BASIC20.69■□□□□ 0.9
PRRX1P54821 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC20.69■□□□□ 0.9
PRRX1P54821 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC20.68■□□□□ 0.9
PRRX1P54821 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
PRRX1P54821 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC20.67■□□□□ 0.9
PRRX1P54821 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PRRX1P54821 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
PRRX1P54821 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC20.67■□□□□ 0.9
PRRX1P54821 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC20.67■□□□□ 0.9
PRRX1P54821 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PRRX1P54821 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
PRRX1P54821 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC20.66■□□□□ 0.9
PRRX1P54821 RNF166-209ENST00000567844 633 ntTSL 5 BASIC20.66■□□□□ 0.9
PRRX1P54821 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PRRX1P54821 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
PRRX1P54821 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PRRX1P54821 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PRRX1P54821 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC20.65■□□□□ 0.9
PRRX1P54821 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PRRX1P54821 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PRRX1P54821 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PRRX1P54821 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC20.65■□□□□ 0.9
PRRX1P54821 MIR7108-201ENST00000614319 87 ntBASIC20.65■□□□□ 0.9
PRRX1P54821 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
PRRX1P54821 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
PRRX1P54821 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
PRRX1P54821 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PRRX1P54821 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
PRRX1P54821 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.89
PRRX1P54821 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
PRRX1P54821 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PRRX1P54821 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PRRX1P54821 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
PRRX1P54821 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PRRX1P54821 CHST11-202ENST00000546689 756 ntTSL 2 BASIC20.63■□□□□ 0.89
PRRX1P54821 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
PRRX1P54821 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PRRX1P54821 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
PRRX1P54821 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC20.63■□□□□ 0.89
PRRX1P54821 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PRRX1P54821 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PRRX1P54821 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
PRRX1P54821 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
PRRX1P54821 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 83.7 ms