Protein–RNA interactions for Protein: P40939

HADHA, Trifunctional enzyme subunit alpha, mitochondrial, humanhuman

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HADHAP40939 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC25.63■■□□□ 1.69
HADHAP40939 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC25.63■■□□□ 1.69
HADHAP40939 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
HADHAP40939 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC25.62■■□□□ 1.69
HADHAP40939 WHAMMP2-203ENST00000563942 1603 ntBASIC25.62■■□□□ 1.69
HADHAP40939 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC25.62■■□□□ 1.69
HADHAP40939 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC25.61■■□□□ 1.69
HADHAP40939 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC25.61■■□□□ 1.69
HADHAP40939 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
HADHAP40939 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC25.61■■□□□ 1.69
HADHAP40939 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC25.61■■□□□ 1.69
HADHAP40939 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC25.61■■□□□ 1.69
HADHAP40939 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
HADHAP40939 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
HADHAP40939 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC25.61■■□□□ 1.69
HADHAP40939 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC25.61■■□□□ 1.69
HADHAP40939 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC25.61■■□□□ 1.69
HADHAP40939 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
HADHAP40939 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC25.6■■□□□ 1.69
HADHAP40939 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
HADHAP40939 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC25.59■■□□□ 1.69
HADHAP40939 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC25.59■■□□□ 1.69
HADHAP40939 HGH1-207ENST00000628266 258 ntTSL 5 BASIC25.59■■□□□ 1.69
HADHAP40939 BX255925.1-201ENST00000566954 1854 ntBASIC25.59■■□□□ 1.69
HADHAP40939 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
HADHAP40939 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC25.58■■□□□ 1.69
HADHAP40939 AC100797.4-201ENST00000631653 1827 ntBASIC25.58■■□□□ 1.69
HADHAP40939 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
HADHAP40939 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
HADHAP40939 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
HADHAP40939 MLEC-202ENST00000412616 841 ntTSL 3 BASIC25.58■■□□□ 1.69
HADHAP40939 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC25.57■■□□□ 1.68
HADHAP40939 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
HADHAP40939 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
HADHAP40939 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
HADHAP40939 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
HADHAP40939 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC25.56■■□□□ 1.68
HADHAP40939 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC25.56■■□□□ 1.68
HADHAP40939 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC25.56■■□□□ 1.68
HADHAP40939 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC25.56■■□□□ 1.68
HADHAP40939 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
HADHAP40939 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC25.55■■□□□ 1.68
HADHAP40939 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC25.55■■□□□ 1.68
HADHAP40939 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
HADHAP40939 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC25.54■■□□□ 1.68
HADHAP40939 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC25.54■■□□□ 1.68
HADHAP40939 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC25.54■■□□□ 1.68
HADHAP40939 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
HADHAP40939 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC25.53■■□□□ 1.68
HADHAP40939 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
HADHAP40939 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
HADHAP40939 AL121749.1-202ENST00000609313 2153 ntBASIC25.53■■□□□ 1.68
HADHAP40939 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC25.52■■□□□ 1.68
HADHAP40939 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
HADHAP40939 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC25.52■■□□□ 1.68
HADHAP40939 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC25.52■■□□□ 1.68
HADHAP40939 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
HADHAP40939 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC25.52■■□□□ 1.68
HADHAP40939 SHF-208ENST00000560734 1731 ntTSL 3 BASIC25.51■■□□□ 1.68
HADHAP40939 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC25.51■■□□□ 1.67
HADHAP40939 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC25.51■■□□□ 1.67
HADHAP40939 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
HADHAP40939 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
HADHAP40939 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
HADHAP40939 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC25.49■■□□□ 1.67
HADHAP40939 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
HADHAP40939 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
HADHAP40939 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
HADHAP40939 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
HADHAP40939 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC25.48■■□□□ 1.67
HADHAP40939 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
HADHAP40939 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
HADHAP40939 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
HADHAP40939 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
HADHAP40939 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC25.47■■□□□ 1.67
HADHAP40939 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
HADHAP40939 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC25.46■■□□□ 1.67
HADHAP40939 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC25.46■■□□□ 1.67
HADHAP40939 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
HADHAP40939 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
HADHAP40939 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC25.46■■□□□ 1.67
HADHAP40939 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.67
HADHAP40939 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.67
HADHAP40939 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC25.45■■□□□ 1.67
HADHAP40939 LINC01971-201ENST00000617888 1048 ntBASIC25.45■■□□□ 1.66
HADHAP40939 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC25.45■■□□□ 1.66
HADHAP40939 LINC01003-201ENST00000564834 1764 ntBASIC25.44■■□□□ 1.66
HADHAP40939 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC25.44■■□□□ 1.66
HADHAP40939 AP002414.2-202ENST00000590929 1450 ntBASIC25.43■■□□□ 1.66
HADHAP40939 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
HADHAP40939 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
HADHAP40939 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC25.42■■□□□ 1.66
HADHAP40939 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC25.41■■□□□ 1.66
HADHAP40939 ZNRF2P2-203ENST00000454624 420 ntBASIC25.41■■□□□ 1.66
HADHAP40939 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC25.41■■□□□ 1.66
HADHAP40939 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC25.41■■□□□ 1.66
HADHAP40939 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC25.41■■□□□ 1.66
HADHAP40939 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC25.41■■□□□ 1.66
HADHAP40939 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
HADHAP40939 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC25.4■■□□□ 1.66
Retrieved 100 of 98,524 protein–RNA pairs in 11.2 ms