Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC21.52■■□□□ 1.04
COL8A2P25067 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
COL8A2P25067 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
COL8A2P25067 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
COL8A2P25067 AC008813.1-201ENST00000536597 885 ntBASIC21.51■■□□□ 1.03
COL8A2P25067 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC21.51■■□□□ 1.03
COL8A2P25067 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC21.5■■□□□ 1.03
COL8A2P25067 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC21.5■■□□□ 1.03
COL8A2P25067 SRP68-213ENST00000629930 165 ntTSL 5 BASIC21.5■■□□□ 1.03
COL8A2P25067 AP004833.2-201ENST00000532228 1454 ntBASIC21.5■■□□□ 1.03
COL8A2P25067 AC139426.1-201ENST00000568218 2529 ntBASIC21.5■■□□□ 1.03
COL8A2P25067 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
COL8A2P25067 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC21.49■■□□□ 1.03
COL8A2P25067 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
COL8A2P25067 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
COL8A2P25067 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
COL8A2P25067 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
COL8A2P25067 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
COL8A2P25067 TPT1-202ENST00000379055 948 ntTSL 2 BASIC21.48■■□□□ 1.03
COL8A2P25067 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC21.48■■□□□ 1.03
COL8A2P25067 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC21.48■■□□□ 1.03
COL8A2P25067 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC21.48■■□□□ 1.03
COL8A2P25067 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
COL8A2P25067 SHF-206ENST00000560471 2499 ntTSL 5 BASIC21.47■■□□□ 1.03
COL8A2P25067 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC21.47■■□□□ 1.03
COL8A2P25067 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
COL8A2P25067 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
COL8A2P25067 PEX7-203ENST00000541292 945 ntTSL 5 BASIC21.47■■□□□ 1.03
COL8A2P25067 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC21.47■■□□□ 1.03
COL8A2P25067 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
COL8A2P25067 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC21.47■■□□□ 1.03
COL8A2P25067 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
COL8A2P25067 AC100797.4-201ENST00000631653 1827 ntBASIC21.46■■□□□ 1.03
COL8A2P25067 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
COL8A2P25067 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC21.46■■□□□ 1.03
COL8A2P25067 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
COL8A2P25067 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
COL8A2P25067 AL139393.2-201ENST00000608721 2025 ntBASIC21.46■■□□□ 1.03
COL8A2P25067 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
COL8A2P25067 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC21.45■■□□□ 1.02
COL8A2P25067 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.02
COL8A2P25067 CHST11-203ENST00000547956 936 ntTSL 2 BASIC21.45■■□□□ 1.02
COL8A2P25067 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC21.45■■□□□ 1.02
COL8A2P25067 BRD4-212ENST00000630599 726 ntTSL 2 BASIC21.45■■□□□ 1.02
COL8A2P25067 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
COL8A2P25067 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
COL8A2P25067 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC21.44■■□□□ 1.02
COL8A2P25067 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
COL8A2P25067 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
COL8A2P25067 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
COL8A2P25067 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
COL8A2P25067 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC21.42■■□□□ 1.02
COL8A2P25067 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
COL8A2P25067 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
COL8A2P25067 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
COL8A2P25067 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC21.42■■□□□ 1.02
COL8A2P25067 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
COL8A2P25067 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC21.42■■□□□ 1.02
COL8A2P25067 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
COL8A2P25067 RPS2-210ENST00000530225 765 ntTSL 2 BASIC21.42■■□□□ 1.02
COL8A2P25067 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
COL8A2P25067 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
COL8A2P25067 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC21.41■■□□□ 1.02
COL8A2P25067 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
COL8A2P25067 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
COL8A2P25067 CEP120-209ENST00000515110 606 ntTSL 3 BASIC21.41■■□□□ 1.02
COL8A2P25067 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC21.41■■□□□ 1.02
COL8A2P25067 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC21.41■■□□□ 1.02
COL8A2P25067 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC21.41■■□□□ 1.02
COL8A2P25067 GPX1-201ENST00000419349 1106 ntBASIC21.4■■□□□ 1.02
COL8A2P25067 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
COL8A2P25067 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
COL8A2P25067 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
COL8A2P25067 ABCB10P3-201ENST00000561950 2166 ntBASIC21.39■■□□□ 1.01
COL8A2P25067 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC21.39■■□□□ 1.01
COL8A2P25067 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
COL8A2P25067 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC21.39■■□□□ 1.01
COL8A2P25067 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC21.39■■□□□ 1.01
COL8A2P25067 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
COL8A2P25067 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
COL8A2P25067 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
COL8A2P25067 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
COL8A2P25067 AC148477.6-201ENST00000623746 465 ntBASIC21.37■■□□□ 1.01
COL8A2P25067 AC022413.1-201ENST00000624602 984 ntBASIC21.37■■□□□ 1.01
COL8A2P25067 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC21.37■■□□□ 1.01
COL8A2P25067 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
COL8A2P25067 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC21.36■■□□□ 1.01
COL8A2P25067 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC21.36■■□□□ 1.01
COL8A2P25067 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
COL8A2P25067 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
COL8A2P25067 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
COL8A2P25067 MIR219A2-201ENST00000608502 1504 ntBASIC21.35■■□□□ 1.01
COL8A2P25067 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
COL8A2P25067 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC21.35■■□□□ 1.01
COL8A2P25067 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
COL8A2P25067 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
COL8A2P25067 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
COL8A2P25067 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
COL8A2P25067 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
COL8A2P25067 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 59.9 ms