Protein–RNA interactions for Protein: P01891

HLA-A, HLA class I histocompatibility antigen, A-68 alpha chain, humanhuman

Known RBP Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-AP01891 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC21.29■■□□□ 1
HLA-AP01891 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
HLA-AP01891 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
HLA-AP01891 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
HLA-AP01891 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC21.27■■□□□ 1
HLA-AP01891 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC21.27■■□□□ 1
HLA-AP01891 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
HLA-AP01891 AC091060.1-201ENST00000623524 1766 ntBASIC21.27■■□□□ 1
HLA-AP01891 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC21.27■□□□□ 0.99
HLA-AP01891 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC21.26■□□□□ 0.99
HLA-AP01891 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
HLA-AP01891 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
HLA-AP01891 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
HLA-AP01891 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
HLA-AP01891 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC21.25■□□□□ 0.99
HLA-AP01891 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
HLA-AP01891 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC21.25■□□□□ 0.99
HLA-AP01891 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
HLA-AP01891 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC21.25■□□□□ 0.99
HLA-AP01891 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC21.24■□□□□ 0.99
HLA-AP01891 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
HLA-AP01891 KLF16-203ENST00000592313 508 ntTSL 3 BASIC21.24■□□□□ 0.99
HLA-AP01891 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC21.24■□□□□ 0.99
HLA-AP01891 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC21.23■□□□□ 0.99
HLA-AP01891 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC21.23■□□□□ 0.99
HLA-AP01891 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC21.23■□□□□ 0.99
HLA-AP01891 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
HLA-AP01891 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC21.23■□□□□ 0.99
HLA-AP01891 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
HLA-AP01891 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC21.22■□□□□ 0.99
HLA-AP01891 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
HLA-AP01891 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
HLA-AP01891 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC21.21■□□□□ 0.99
HLA-AP01891 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
HLA-AP01891 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
HLA-AP01891 AC020928.2-201ENST00000588717 2197 ntBASIC21.21■□□□□ 0.99
HLA-AP01891 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC21.21■□□□□ 0.99
HLA-AP01891 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
HLA-AP01891 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
HLA-AP01891 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
HLA-AP01891 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC21.2■□□□□ 0.98
HLA-AP01891 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC21.19■□□□□ 0.98
HLA-AP01891 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC21.19■□□□□ 0.98
HLA-AP01891 RARRES2P7-201ENST00000567349 469 ntBASIC21.18■□□□□ 0.98
HLA-AP01891 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
HLA-AP01891 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
HLA-AP01891 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
HLA-AP01891 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
HLA-AP01891 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC21.17■□□□□ 0.98
HLA-AP01891 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC21.17■□□□□ 0.98
HLA-AP01891 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC21.17■□□□□ 0.98
HLA-AP01891 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC21.17■□□□□ 0.98
HLA-AP01891 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
HLA-AP01891 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC21.17■□□□□ 0.98
HLA-AP01891 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC21.16■□□□□ 0.98
HLA-AP01891 AC145676.1-201ENST00000514988 2004 ntBASIC21.15■□□□□ 0.98
HLA-AP01891 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC21.15■□□□□ 0.98
HLA-AP01891 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
HLA-AP01891 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC21.14■□□□□ 0.98
HLA-AP01891 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC21.14■□□□□ 0.98
HLA-AP01891 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
HLA-AP01891 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
HLA-AP01891 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
HLA-AP01891 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
HLA-AP01891 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
HLA-AP01891 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
HLA-AP01891 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
HLA-AP01891 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC21.12■□□□□ 0.97
HLA-AP01891 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
HLA-AP01891 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
HLA-AP01891 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC21.12■□□□□ 0.97
HLA-AP01891 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
HLA-AP01891 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
HLA-AP01891 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC21.12■□□□□ 0.97
HLA-AP01891 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
HLA-AP01891 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC21.11■□□□□ 0.97
HLA-AP01891 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
HLA-AP01891 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC21.11■□□□□ 0.97
HLA-AP01891 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC21.11■□□□□ 0.97
HLA-AP01891 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC21.11■□□□□ 0.97
HLA-AP01891 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
HLA-AP01891 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
HLA-AP01891 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
HLA-AP01891 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
HLA-AP01891 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
HLA-AP01891 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
HLA-AP01891 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC21.1■□□□□ 0.97
HLA-AP01891 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
HLA-AP01891 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
HLA-AP01891 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
HLA-AP01891 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
HLA-AP01891 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
HLA-AP01891 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
HLA-AP01891 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
HLA-AP01891 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
HLA-AP01891 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.96
HLA-AP01891 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
HLA-AP01891 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
HLA-AP01891 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
HLA-AP01891 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 11.7 ms