Protein–RNA interactions for Protein: O96005

CLPTM1, Cleft lip and palate transmembrane protein 1, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1O96005 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
CLPTM1O96005 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
CLPTM1O96005 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
CLPTM1O96005 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC23.72■■□□□ 1.39
CLPTM1O96005 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC23.71■■□□□ 1.39
CLPTM1O96005 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC23.71■■□□□ 1.39
CLPTM1O96005 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
CLPTM1O96005 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC23.7■■□□□ 1.39
CLPTM1O96005 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC23.7■■□□□ 1.39
CLPTM1O96005 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
CLPTM1O96005 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
CLPTM1O96005 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC23.7■■□□□ 1.38
CLPTM1O96005 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC23.69■■□□□ 1.38
CLPTM1O96005 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC23.69■■□□□ 1.38
CLPTM1O96005 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC23.69■■□□□ 1.38
CLPTM1O96005 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
CLPTM1O96005 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
CLPTM1O96005 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
CLPTM1O96005 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
CLPTM1O96005 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC23.68■■□□□ 1.38
CLPTM1O96005 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC23.68■■□□□ 1.38
CLPTM1O96005 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC23.67■■□□□ 1.38
CLPTM1O96005 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
CLPTM1O96005 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC23.67■■□□□ 1.38
CLPTM1O96005 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC23.66■■□□□ 1.38
CLPTM1O96005 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC23.66■■□□□ 1.38
CLPTM1O96005 AC097358.2-201ENST00000607541 1159 ntBASIC23.66■■□□□ 1.38
CLPTM1O96005 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
CLPTM1O96005 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
CLPTM1O96005 PROC-203ENST00000409048 1586 ntTSL 5 BASIC23.65■■□□□ 1.38
CLPTM1O96005 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC23.65■■□□□ 1.38
CLPTM1O96005 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC23.65■■□□□ 1.38
CLPTM1O96005 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
CLPTM1O96005 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
CLPTM1O96005 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
CLPTM1O96005 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC23.65■■□□□ 1.38
CLPTM1O96005 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC23.65■■□□□ 1.38
CLPTM1O96005 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC23.65■■□□□ 1.38
CLPTM1O96005 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
CLPTM1O96005 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
CLPTM1O96005 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
CLPTM1O96005 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC23.63■■□□□ 1.37
CLPTM1O96005 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
CLPTM1O96005 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
CLPTM1O96005 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
CLPTM1O96005 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC23.63■■□□□ 1.37
CLPTM1O96005 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC23.62■■□□□ 1.37
CLPTM1O96005 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
CLPTM1O96005 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
CLPTM1O96005 AL133380.1-201ENST00000506013 324 ntBASIC23.62■■□□□ 1.37
CLPTM1O96005 AC136428.2-201ENST00000563187 214 ntBASIC23.62■■□□□ 1.37
CLPTM1O96005 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC23.61■■□□□ 1.37
CLPTM1O96005 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
CLPTM1O96005 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
CLPTM1O96005 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
CLPTM1O96005 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
CLPTM1O96005 LINC01003-201ENST00000564834 1764 ntBASIC23.6■■□□□ 1.37
CLPTM1O96005 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC23.6■■□□□ 1.37
CLPTM1O96005 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC23.6■■□□□ 1.37
CLPTM1O96005 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
CLPTM1O96005 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC23.6■■□□□ 1.37
CLPTM1O96005 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC23.59■■□□□ 1.37
CLPTM1O96005 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
CLPTM1O96005 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC23.59■■□□□ 1.37
CLPTM1O96005 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
CLPTM1O96005 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
CLPTM1O96005 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
CLPTM1O96005 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
CLPTM1O96005 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
CLPTM1O96005 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
CLPTM1O96005 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
CLPTM1O96005 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
CLPTM1O96005 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.36
CLPTM1O96005 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC23.58■■□□□ 1.36
CLPTM1O96005 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC23.57■■□□□ 1.36
CLPTM1O96005 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
CLPTM1O96005 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC23.57■■□□□ 1.36
CLPTM1O96005 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
CLPTM1O96005 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC23.57■■□□□ 1.36
CLPTM1O96005 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC23.57■■□□□ 1.36
CLPTM1O96005 AC145676.1-201ENST00000514988 2004 ntBASIC23.57■■□□□ 1.36
CLPTM1O96005 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
CLPTM1O96005 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC23.57■■□□□ 1.36
CLPTM1O96005 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC23.56■■□□□ 1.36
CLPTM1O96005 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
CLPTM1O96005 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
CLPTM1O96005 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC23.56■■□□□ 1.36
CLPTM1O96005 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC23.55■■□□□ 1.36
CLPTM1O96005 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
CLPTM1O96005 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC23.55■■□□□ 1.36
CLPTM1O96005 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC23.54■■□□□ 1.36
CLPTM1O96005 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC23.54■■□□□ 1.36
CLPTM1O96005 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC23.54■■□□□ 1.36
CLPTM1O96005 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC23.54■■□□□ 1.36
CLPTM1O96005 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
CLPTM1O96005 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC23.53■■□□□ 1.36
CLPTM1O96005 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
CLPTM1O96005 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC23.53■■□□□ 1.36
CLPTM1O96005 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
CLPTM1O96005 RARA-203ENST00000394086 2008 ntTSL 2 BASIC23.53■■□□□ 1.36
Retrieved 100 of 98,524 protein–RNA pairs in 58.7 ms