Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SSSCA1O60232 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
SSSCA1O60232 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
SSSCA1O60232 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC20.59■□□□□ 0.89
SSSCA1O60232 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
SSSCA1O60232 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC20.59■□□□□ 0.89
SSSCA1O60232 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SSSCA1O60232 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
SSSCA1O60232 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC20.59■□□□□ 0.89
SSSCA1O60232 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
SSSCA1O60232 AC127502.1-201ENST00000399971 1502 ntBASIC20.58■□□□□ 0.89
SSSCA1O60232 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC20.58■□□□□ 0.89
SSSCA1O60232 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SSSCA1O60232 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
SSSCA1O60232 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC20.58■□□□□ 0.88
SSSCA1O60232 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
SSSCA1O60232 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
SSSCA1O60232 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
SSSCA1O60232 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
SSSCA1O60232 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
SSSCA1O60232 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SSSCA1O60232 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SSSCA1O60232 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SSSCA1O60232 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SSSCA1O60232 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC20.55■□□□□ 0.88
SSSCA1O60232 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SSSCA1O60232 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
SSSCA1O60232 AC100797.4-201ENST00000631653 1827 ntBASIC20.55■□□□□ 0.88
SSSCA1O60232 AC091060.1-201ENST00000623524 1766 ntBASIC20.54■□□□□ 0.88
SSSCA1O60232 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SSSCA1O60232 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
SSSCA1O60232 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
SSSCA1O60232 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
SSSCA1O60232 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC20.53■□□□□ 0.88
SSSCA1O60232 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SSSCA1O60232 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SSSCA1O60232 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
SSSCA1O60232 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SSSCA1O60232 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
SSSCA1O60232 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC20.51■□□□□ 0.87
SSSCA1O60232 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SSSCA1O60232 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
SSSCA1O60232 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SSSCA1O60232 PKM-204ENST00000449901 2526 ntTSL 2 BASIC20.5■□□□□ 0.87
SSSCA1O60232 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC20.49■□□□□ 0.87
SSSCA1O60232 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
SSSCA1O60232 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SSSCA1O60232 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
SSSCA1O60232 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
SSSCA1O60232 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
SSSCA1O60232 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
SSSCA1O60232 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC20.48■□□□□ 0.87
SSSCA1O60232 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SSSCA1O60232 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SSSCA1O60232 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SSSCA1O60232 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SSSCA1O60232 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SSSCA1O60232 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC20.47■□□□□ 0.87
SSSCA1O60232 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
SSSCA1O60232 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SSSCA1O60232 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SSSCA1O60232 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SSSCA1O60232 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SSSCA1O60232 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC20.46■□□□□ 0.87
SSSCA1O60232 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
SSSCA1O60232 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC20.46■□□□□ 0.87
SSSCA1O60232 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SSSCA1O60232 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SSSCA1O60232 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SSSCA1O60232 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SSSCA1O60232 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC20.45■□□□□ 0.86
SSSCA1O60232 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
SSSCA1O60232 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
SSSCA1O60232 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
SSSCA1O60232 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
SSSCA1O60232 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC20.45■□□□□ 0.86
SSSCA1O60232 AP002414.2-202ENST00000590929 1450 ntBASIC20.44■□□□□ 0.86
SSSCA1O60232 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
SSSCA1O60232 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC20.44■□□□□ 0.86
SSSCA1O60232 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
SSSCA1O60232 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
SSSCA1O60232 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
SSSCA1O60232 AC020928.2-201ENST00000588717 2197 ntBASIC20.43■□□□□ 0.86
SSSCA1O60232 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC20.43■□□□□ 0.86
SSSCA1O60232 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC20.43■□□□□ 0.86
SSSCA1O60232 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SSSCA1O60232 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SSSCA1O60232 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC20.43■□□□□ 0.86
SSSCA1O60232 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
SSSCA1O60232 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC20.42■□□□□ 0.86
SSSCA1O60232 AC145676.1-201ENST00000514988 2004 ntBASIC20.42■□□□□ 0.86
SSSCA1O60232 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
SSSCA1O60232 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
SSSCA1O60232 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
SSSCA1O60232 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SSSCA1O60232 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
SSSCA1O60232 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SSSCA1O60232 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
SSSCA1O60232 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC20.41■□□□□ 0.86
SSSCA1O60232 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 9.8 ms