Protein–RNA interactions for Protein: O43623

SNAI2, Zinc finger protein SNAI2, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAI2O43623 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SNAI2O43623 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
SNAI2O43623 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
SNAI2O43623 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
SNAI2O43623 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC18.75■□□□□ 0.59
SNAI2O43623 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
SNAI2O43623 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SNAI2O43623 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SNAI2O43623 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SNAI2O43623 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SNAI2O43623 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SNAI2O43623 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
SNAI2O43623 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
SNAI2O43623 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
SNAI2O43623 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
SNAI2O43623 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SNAI2O43623 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
SNAI2O43623 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SNAI2O43623 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC18.72■□□□□ 0.59
SNAI2O43623 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC18.72■□□□□ 0.59
SNAI2O43623 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC18.72■□□□□ 0.59
SNAI2O43623 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
SNAI2O43623 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC18.71■□□□□ 0.59
SNAI2O43623 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC18.71■□□□□ 0.59
SNAI2O43623 AC127502.1-201ENST00000399971 1502 ntBASIC18.71■□□□□ 0.59
SNAI2O43623 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
SNAI2O43623 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC18.71■□□□□ 0.59
SNAI2O43623 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
SNAI2O43623 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SNAI2O43623 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
SNAI2O43623 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SNAI2O43623 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC18.7■□□□□ 0.58
SNAI2O43623 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SNAI2O43623 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC18.7■□□□□ 0.58
SNAI2O43623 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SNAI2O43623 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
SNAI2O43623 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC18.7■□□□□ 0.58
SNAI2O43623 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SNAI2O43623 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
SNAI2O43623 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC18.7■□□□□ 0.58
SNAI2O43623 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC18.69■□□□□ 0.58
SNAI2O43623 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SNAI2O43623 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SNAI2O43623 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
SNAI2O43623 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SNAI2O43623 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SNAI2O43623 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC18.68■□□□□ 0.58
SNAI2O43623 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC18.67■□□□□ 0.58
SNAI2O43623 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SNAI2O43623 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SNAI2O43623 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
SNAI2O43623 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SNAI2O43623 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SNAI2O43623 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC18.66■□□□□ 0.58
SNAI2O43623 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SNAI2O43623 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SNAI2O43623 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
SNAI2O43623 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
SNAI2O43623 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC18.66■□□□□ 0.58
SNAI2O43623 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SNAI2O43623 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SNAI2O43623 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SNAI2O43623 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SNAI2O43623 PKM-203ENST00000389093 2279 ntTSL 5 BASIC18.65■□□□□ 0.58
SNAI2O43623 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
SNAI2O43623 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
SNAI2O43623 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
SNAI2O43623 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SNAI2O43623 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SNAI2O43623 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SNAI2O43623 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SNAI2O43623 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC18.63■□□□□ 0.57
SNAI2O43623 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SNAI2O43623 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SNAI2O43623 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SNAI2O43623 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC18.62■□□□□ 0.57
SNAI2O43623 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC18.62■□□□□ 0.57
SNAI2O43623 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SNAI2O43623 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SNAI2O43623 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SNAI2O43623 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SNAI2O43623 SNAI3-AS1-204ENST00000567997 2048 ntBASIC18.61■□□□□ 0.57
SNAI2O43623 DENR-202ENST00000455982 1052 ntTSL 5 BASIC18.61■□□□□ 0.57
SNAI2O43623 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC18.61■□□□□ 0.57
SNAI2O43623 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SNAI2O43623 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC18.61■□□□□ 0.57
SNAI2O43623 AC100797.4-201ENST00000631653 1827 ntBASIC18.6■□□□□ 0.57
SNAI2O43623 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
SNAI2O43623 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
SNAI2O43623 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC18.6■□□□□ 0.57
SNAI2O43623 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
SNAI2O43623 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
SNAI2O43623 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
SNAI2O43623 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SNAI2O43623 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
SNAI2O43623 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
SNAI2O43623 AP002414.2-202ENST00000590929 1450 ntBASIC18.58■□□□□ 0.57
SNAI2O43623 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
SNAI2O43623 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC18.58■□□□□ 0.56
SNAI2O43623 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 48.4 ms