Protein–RNA interactions for Protein: A6NFC5

TMEM235, Transmembrane protein 235, humanhuman

Predictions only

Length 223 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM235A6NFC5 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC21.6■■□□□ 1.05
TMEM235A6NFC5 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
TMEM235A6NFC5 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
TMEM235A6NFC5 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC21.6■■□□□ 1.05
TMEM235A6NFC5 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
TMEM235A6NFC5 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
TMEM235A6NFC5 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC21.6■■□□□ 1.05
TMEM235A6NFC5 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
TMEM235A6NFC5 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
TMEM235A6NFC5 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
TMEM235A6NFC5 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
TMEM235A6NFC5 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC21.59■■□□□ 1.05
TMEM235A6NFC5 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC21.59■■□□□ 1.05
TMEM235A6NFC5 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
TMEM235A6NFC5 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC21.58■■□□□ 1.05
TMEM235A6NFC5 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
TMEM235A6NFC5 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC21.58■■□□□ 1.05
TMEM235A6NFC5 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
TMEM235A6NFC5 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
TMEM235A6NFC5 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
TMEM235A6NFC5 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
TMEM235A6NFC5 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
TMEM235A6NFC5 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC21.56■■□□□ 1.04
TMEM235A6NFC5 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
TMEM235A6NFC5 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
TMEM235A6NFC5 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
TMEM235A6NFC5 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
TMEM235A6NFC5 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
TMEM235A6NFC5 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
TMEM235A6NFC5 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
TMEM235A6NFC5 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
TMEM235A6NFC5 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
TMEM235A6NFC5 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC21.54■■□□□ 1.04
TMEM235A6NFC5 DENR-202ENST00000455982 1052 ntTSL 5 BASIC21.53■■□□□ 1.04
TMEM235A6NFC5 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC21.53■■□□□ 1.04
TMEM235A6NFC5 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
TMEM235A6NFC5 AP002414.2-202ENST00000590929 1450 ntBASIC21.52■■□□□ 1.04
TMEM235A6NFC5 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
TMEM235A6NFC5 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
TMEM235A6NFC5 RARRES2P7-201ENST00000567349 469 ntBASIC21.52■■□□□ 1.04
TMEM235A6NFC5 SETD8P1-201ENST00000623146 1180 ntBASIC21.52■■□□□ 1.04
TMEM235A6NFC5 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
TMEM235A6NFC5 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
TMEM235A6NFC5 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC21.5■■□□□ 1.03
TMEM235A6NFC5 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
TMEM235A6NFC5 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
TMEM235A6NFC5 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
TMEM235A6NFC5 AC091060.1-201ENST00000623524 1766 ntBASIC21.49■■□□□ 1.03
TMEM235A6NFC5 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
TMEM235A6NFC5 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
TMEM235A6NFC5 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
TMEM235A6NFC5 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
TMEM235A6NFC5 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC21.48■■□□□ 1.03
TMEM235A6NFC5 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
TMEM235A6NFC5 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC21.47■■□□□ 1.03
TMEM235A6NFC5 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
TMEM235A6NFC5 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC21.46■■□□□ 1.03
TMEM235A6NFC5 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
TMEM235A6NFC5 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
TMEM235A6NFC5 EBPL-202ENST00000378268 680 ntTSL 3 BASIC21.46■■□□□ 1.03
TMEM235A6NFC5 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
TMEM235A6NFC5 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
TMEM235A6NFC5 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
TMEM235A6NFC5 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.03
TMEM235A6NFC5 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC21.45■■□□□ 1.02
TMEM235A6NFC5 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC21.45■■□□□ 1.02
TMEM235A6NFC5 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC21.45■■□□□ 1.02
TMEM235A6NFC5 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC21.45■■□□□ 1.02
TMEM235A6NFC5 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC21.45■■□□□ 1.02
TMEM235A6NFC5 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC21.45■■□□□ 1.02
TMEM235A6NFC5 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC21.44■■□□□ 1.02
TMEM235A6NFC5 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
TMEM235A6NFC5 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
TMEM235A6NFC5 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
TMEM235A6NFC5 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
TMEM235A6NFC5 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC21.43■■□□□ 1.02
TMEM235A6NFC5 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
TMEM235A6NFC5 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
TMEM235A6NFC5 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
TMEM235A6NFC5 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC21.42■■□□□ 1.02
TMEM235A6NFC5 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
TMEM235A6NFC5 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
TMEM235A6NFC5 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
TMEM235A6NFC5 AL391121.1-201ENST00000607967 1349 ntBASIC21.41■■□□□ 1.02
TMEM235A6NFC5 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC21.41■■□□□ 1.02
TMEM235A6NFC5 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC21.41■■□□□ 1.02
TMEM235A6NFC5 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
TMEM235A6NFC5 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC21.41■■□□□ 1.02
TMEM235A6NFC5 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC21.4■■□□□ 1.02
TMEM235A6NFC5 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC21.4■■□□□ 1.02
TMEM235A6NFC5 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
TMEM235A6NFC5 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
TMEM235A6NFC5 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
TMEM235A6NFC5 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
TMEM235A6NFC5 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC21.4■■□□□ 1.02
TMEM235A6NFC5 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
TMEM235A6NFC5 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC21.39■■□□□ 1.02
TMEM235A6NFC5 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC21.39■■□□□ 1.01
TMEM235A6NFC5 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
TMEM235A6NFC5 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms