Protein–RNA interactions for Protein: A0A576

TCRBV9S1A1T, T-cell receptor beta variable 3-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV9S1A1TA0A576 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC25.62■■□□□ 1.69
TCRBV9S1A1TA0A576 PKM-203ENST00000389093 2279 ntTSL 5 BASIC25.62■■□□□ 1.69
TCRBV9S1A1TA0A576 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
TCRBV9S1A1TA0A576 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC25.61■■□□□ 1.69
TCRBV9S1A1TA0A576 SHF-207ENST00000560540 2062 ntTSL 5 BASIC25.61■■□□□ 1.69
TCRBV9S1A1TA0A576 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC25.61■■□□□ 1.69
TCRBV9S1A1TA0A576 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC25.61■■□□□ 1.69
TCRBV9S1A1TA0A576 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC25.6■■□□□ 1.69
TCRBV9S1A1TA0A576 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC25.6■■□□□ 1.69
TCRBV9S1A1TA0A576 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
TCRBV9S1A1TA0A576 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
TCRBV9S1A1TA0A576 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC25.58■■□□□ 1.69
TCRBV9S1A1TA0A576 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC25.58■■□□□ 1.69
TCRBV9S1A1TA0A576 AC135983.2-203ENST00000454486 1613 ntBASIC25.57■■□□□ 1.68
TCRBV9S1A1TA0A576 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC25.57■■□□□ 1.68
TCRBV9S1A1TA0A576 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC25.57■■□□□ 1.68
TCRBV9S1A1TA0A576 MEST-211ENST00000437945 1455 ntTSL 5 BASIC25.57■■□□□ 1.68
TCRBV9S1A1TA0A576 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC25.57■■□□□ 1.68
TCRBV9S1A1TA0A576 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
TCRBV9S1A1TA0A576 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
TCRBV9S1A1TA0A576 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC25.56■■□□□ 1.68
TCRBV9S1A1TA0A576 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC25.56■■□□□ 1.68
TCRBV9S1A1TA0A576 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
TCRBV9S1A1TA0A576 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC25.55■■□□□ 1.68
TCRBV9S1A1TA0A576 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC25.55■■□□□ 1.68
TCRBV9S1A1TA0A576 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
TCRBV9S1A1TA0A576 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC25.54■■□□□ 1.68
TCRBV9S1A1TA0A576 AC005559.1-201ENST00000589661 871 ntBASIC25.54■■□□□ 1.68
TCRBV9S1A1TA0A576 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
TCRBV9S1A1TA0A576 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC25.54■■□□□ 1.68
TCRBV9S1A1TA0A576 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC25.54■■□□□ 1.68
TCRBV9S1A1TA0A576 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
TCRBV9S1A1TA0A576 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
TCRBV9S1A1TA0A576 SUZ12P1-203ENST00000578195 985 ntBASIC25.53■■□□□ 1.68
TCRBV9S1A1TA0A576 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
TCRBV9S1A1TA0A576 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
TCRBV9S1A1TA0A576 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC25.52■■□□□ 1.68
TCRBV9S1A1TA0A576 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC25.51■■□□□ 1.67
TCRBV9S1A1TA0A576 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC25.51■■□□□ 1.67
TCRBV9S1A1TA0A576 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC25.51■■□□□ 1.67
TCRBV9S1A1TA0A576 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC25.51■■□□□ 1.67
TCRBV9S1A1TA0A576 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
TCRBV9S1A1TA0A576 WHAMMP2-203ENST00000563942 1603 ntBASIC25.51■■□□□ 1.67
TCRBV9S1A1TA0A576 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
TCRBV9S1A1TA0A576 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC25.5■■□□□ 1.67
TCRBV9S1A1TA0A576 HNRNPLP2-201ENST00000568980 1570 ntBASIC25.5■■□□□ 1.67
TCRBV9S1A1TA0A576 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC25.49■■□□□ 1.67
TCRBV9S1A1TA0A576 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
TCRBV9S1A1TA0A576 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
TCRBV9S1A1TA0A576 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC25.49■■□□□ 1.67
TCRBV9S1A1TA0A576 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC25.49■■□□□ 1.67
TCRBV9S1A1TA0A576 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
TCRBV9S1A1TA0A576 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC25.48■■□□□ 1.67
TCRBV9S1A1TA0A576 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC25.48■■□□□ 1.67
TCRBV9S1A1TA0A576 AC018358.1-201ENST00000631079 1402 ntBASIC25.48■■□□□ 1.67
TCRBV9S1A1TA0A576 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
TCRBV9S1A1TA0A576 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC25.48■■□□□ 1.67
TCRBV9S1A1TA0A576 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
TCRBV9S1A1TA0A576 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC25.47■■□□□ 1.67
TCRBV9S1A1TA0A576 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC25.47■■□□□ 1.67
TCRBV9S1A1TA0A576 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC25.47■■□□□ 1.67
TCRBV9S1A1TA0A576 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
TCRBV9S1A1TA0A576 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC25.46■■□□□ 1.67
TCRBV9S1A1TA0A576 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC25.45■■□□□ 1.66
TCRBV9S1A1TA0A576 AC108673.1-201ENST00000510422 1159 ntBASIC25.45■■□□□ 1.66
TCRBV9S1A1TA0A576 MIR6090-201ENST00000622481 60 ntBASIC25.45■■□□□ 1.66
TCRBV9S1A1TA0A576 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
TCRBV9S1A1TA0A576 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
TCRBV9S1A1TA0A576 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
TCRBV9S1A1TA0A576 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC25.43■■□□□ 1.66
TCRBV9S1A1TA0A576 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
TCRBV9S1A1TA0A576 EI24-212ENST00000615917 1407 ntTSL 2 BASIC25.43■■□□□ 1.66
TCRBV9S1A1TA0A576 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC25.42■■□□□ 1.66
TCRBV9S1A1TA0A576 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC25.42■■□□□ 1.66
TCRBV9S1A1TA0A576 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
TCRBV9S1A1TA0A576 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC25.42■■□□□ 1.66
TCRBV9S1A1TA0A576 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC25.42■■□□□ 1.66
TCRBV9S1A1TA0A576 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
TCRBV9S1A1TA0A576 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
TCRBV9S1A1TA0A576 LINC00273-201ENST00000539813 1452 ntBASIC25.41■■□□□ 1.66
TCRBV9S1A1TA0A576 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
TCRBV9S1A1TA0A576 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC25.41■■□□□ 1.66
TCRBV9S1A1TA0A576 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
TCRBV9S1A1TA0A576 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
TCRBV9S1A1TA0A576 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
TCRBV9S1A1TA0A576 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC25.4■■□□□ 1.66
TCRBV9S1A1TA0A576 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC25.4■■□□□ 1.66
TCRBV9S1A1TA0A576 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC25.4■■□□□ 1.66
TCRBV9S1A1TA0A576 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC25.4■■□□□ 1.66
TCRBV9S1A1TA0A576 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC25.4■■□□□ 1.66
TCRBV9S1A1TA0A576 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
TCRBV9S1A1TA0A576 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC25.39■■□□□ 1.65
TCRBV9S1A1TA0A576 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC25.39■■□□□ 1.65
TCRBV9S1A1TA0A576 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC25.39■■□□□ 1.65
TCRBV9S1A1TA0A576 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC25.38■■□□□ 1.65
TCRBV9S1A1TA0A576 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
TCRBV9S1A1TA0A576 DUX4L28-201ENST00000623687 678 ntBASIC25.38■■□□□ 1.65
TCRBV9S1A1TA0A576 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
TCRBV9S1A1TA0A576 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
TCRBV9S1A1TA0A576 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC25.37■■□□□ 1.65
Retrieved 100 of 98,524 protein–RNA pairs in 73.6 ms