Protein–RNA interactions for Protein: A0A1W2PRF3

Uncharacterized protein, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
A0A1W2PRF3 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
A0A1W2PRF3 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
A0A1W2PRF3 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC20.81■□□□□ 0.92
A0A1W2PRF3 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
A0A1W2PRF3 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC20.81■□□□□ 0.92
A0A1W2PRF3 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC20.81■□□□□ 0.92
A0A1W2PRF3 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
A0A1W2PRF3 ABCB10P3-201ENST00000561950 2166 ntBASIC20.79■□□□□ 0.92
A0A1W2PRF3 MIR4449-201ENST00000578365 66 ntBASIC20.79■□□□□ 0.92
A0A1W2PRF3 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
A0A1W2PRF3 MEST-211ENST00000437945 1455 ntTSL 5 BASIC20.79■□□□□ 0.92
A0A1W2PRF3 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
A0A1W2PRF3 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC20.78■□□□□ 0.92
A0A1W2PRF3 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
A0A1W2PRF3 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC20.78■□□□□ 0.92
A0A1W2PRF3 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC20.78■□□□□ 0.92
A0A1W2PRF3 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC20.78■□□□□ 0.92
A0A1W2PRF3 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC20.77■□□□□ 0.92
A0A1W2PRF3 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
A0A1W2PRF3 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC20.77■□□□□ 0.92
A0A1W2PRF3 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
A0A1W2PRF3 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
A0A1W2PRF3 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC20.77■□□□□ 0.91
A0A1W2PRF3 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
A0A1W2PRF3 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
A0A1W2PRF3 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC20.76■□□□□ 0.91
A0A1W2PRF3 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
A0A1W2PRF3 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
A0A1W2PRF3 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC20.75■□□□□ 0.91
A0A1W2PRF3 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
A0A1W2PRF3 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
A0A1W2PRF3 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC20.75■□□□□ 0.91
A0A1W2PRF3 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
A0A1W2PRF3 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
A0A1W2PRF3 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC20.74■□□□□ 0.91
A0A1W2PRF3 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC20.74■□□□□ 0.91
A0A1W2PRF3 AP004833.2-201ENST00000532228 1454 ntBASIC20.74■□□□□ 0.91
A0A1W2PRF3 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
A0A1W2PRF3 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
A0A1W2PRF3 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
A0A1W2PRF3 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
A0A1W2PRF3 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC20.73■□□□□ 0.91
A0A1W2PRF3 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
A0A1W2PRF3 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
A0A1W2PRF3 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
A0A1W2PRF3 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
A0A1W2PRF3 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
A0A1W2PRF3 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
A0A1W2PRF3 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
A0A1W2PRF3 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC20.72■□□□□ 0.91
A0A1W2PRF3 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
A0A1W2PRF3 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
A0A1W2PRF3 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
A0A1W2PRF3 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
A0A1W2PRF3 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
A0A1W2PRF3 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
A0A1W2PRF3 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
A0A1W2PRF3 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
A0A1W2PRF3 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
A0A1W2PRF3 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
A0A1W2PRF3 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC20.7■□□□□ 0.9
A0A1W2PRF3 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
A0A1W2PRF3 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC20.69■□□□□ 0.9
A0A1W2PRF3 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
A0A1W2PRF3 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
A0A1W2PRF3 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
A0A1W2PRF3 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
A0A1W2PRF3 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
A0A1W2PRF3 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
A0A1W2PRF3 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
A0A1W2PRF3 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC20.67■□□□□ 0.9
A0A1W2PRF3 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
A0A1W2PRF3 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC20.67■□□□□ 0.9
A0A1W2PRF3 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC20.67■□□□□ 0.9
A0A1W2PRF3 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
A0A1W2PRF3 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC20.67■□□□□ 0.9
A0A1W2PRF3 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
A0A1W2PRF3 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC20.66■□□□□ 0.9
A0A1W2PRF3 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC20.66■□□□□ 0.9
A0A1W2PRF3 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC20.66■□□□□ 0.9
A0A1W2PRF3 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
A0A1W2PRF3 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
A0A1W2PRF3 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC20.65■□□□□ 0.9
A0A1W2PRF3 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
A0A1W2PRF3 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
A0A1W2PRF3 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC20.65■□□□□ 0.9
A0A1W2PRF3 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
A0A1W2PRF3 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
A0A1W2PRF3 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC20.65■□□□□ 0.9
A0A1W2PRF3 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
A0A1W2PRF3 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
A0A1W2PRF3 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
A0A1W2PRF3 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
A0A1W2PRF3 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
A0A1W2PRF3 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
A0A1W2PRF3 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
A0A1W2PRF3 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC20.65■□□□□ 0.9
A0A1W2PRF3 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC20.64■□□□□ 0.9
A0A1W2PRF3 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
A0A1W2PRF3 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 116.4 ms