Protein–RNA interactions for Protein: A0A0A6YYK7

TRAV19, T-cell receptor alpha variable 19 (Fragment), humanhuman

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV19A0A0A6YYK7 AP004833.2-201ENST00000532228 1454 ntBASIC26.55■■□□□ 1.84
TRAV19A0A0A6YYK7 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC26.55■■□□□ 1.84
TRAV19A0A0A6YYK7 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC26.55■■□□□ 1.84
TRAV19A0A0A6YYK7 PEX7-203ENST00000541292 945 ntTSL 5 BASIC26.55■■□□□ 1.84
TRAV19A0A0A6YYK7 AC022413.1-201ENST00000624602 984 ntBASIC26.55■■□□□ 1.84
TRAV19A0A0A6YYK7 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC26.55■■□□□ 1.84
TRAV19A0A0A6YYK7 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
TRAV19A0A0A6YYK7 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
TRAV19A0A0A6YYK7 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC26.54■■□□□ 1.84
TRAV19A0A0A6YYK7 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
TRAV19A0A0A6YYK7 RNF126P1-201ENST00000567452 1320 ntBASIC26.54■■□□□ 1.84
TRAV19A0A0A6YYK7 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC26.54■■□□□ 1.84
TRAV19A0A0A6YYK7 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC26.54■■□□□ 1.84
TRAV19A0A0A6YYK7 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
TRAV19A0A0A6YYK7 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC26.52■■□□□ 1.84
TRAV19A0A0A6YYK7 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC26.52■■□□□ 1.84
TRAV19A0A0A6YYK7 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
TRAV19A0A0A6YYK7 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
TRAV19A0A0A6YYK7 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
TRAV19A0A0A6YYK7 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
TRAV19A0A0A6YYK7 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC26.5■■□□□ 1.83
TRAV19A0A0A6YYK7 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC26.49■■□□□ 1.83
TRAV19A0A0A6YYK7 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
TRAV19A0A0A6YYK7 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
TRAV19A0A0A6YYK7 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC26.48■■□□□ 1.83
TRAV19A0A0A6YYK7 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC26.47■■□□□ 1.83
TRAV19A0A0A6YYK7 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC26.47■■□□□ 1.83
TRAV19A0A0A6YYK7 MIR219A2-201ENST00000608502 1504 ntBASIC26.47■■□□□ 1.83
TRAV19A0A0A6YYK7 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC26.47■■□□□ 1.83
TRAV19A0A0A6YYK7 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
TRAV19A0A0A6YYK7 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC26.47■■□□□ 1.83
TRAV19A0A0A6YYK7 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
TRAV19A0A0A6YYK7 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
TRAV19A0A0A6YYK7 HES4-202ENST00000428771 1040 ntTSL 2 BASIC26.46■■□□□ 1.83
TRAV19A0A0A6YYK7 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC26.46■■□□□ 1.83
TRAV19A0A0A6YYK7 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC26.46■■□□□ 1.83
TRAV19A0A0A6YYK7 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC26.45■■□□□ 1.82
TRAV19A0A0A6YYK7 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
TRAV19A0A0A6YYK7 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
TRAV19A0A0A6YYK7 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
TRAV19A0A0A6YYK7 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC26.44■■□□□ 1.82
TRAV19A0A0A6YYK7 ABHD17AP5-201ENST00000580133 923 ntBASIC26.44■■□□□ 1.82
TRAV19A0A0A6YYK7 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
TRAV19A0A0A6YYK7 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC26.43■■□□□ 1.82
TRAV19A0A0A6YYK7 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC26.42■■□□□ 1.82
TRAV19A0A0A6YYK7 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
TRAV19A0A0A6YYK7 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
TRAV19A0A0A6YYK7 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
TRAV19A0A0A6YYK7 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
TRAV19A0A0A6YYK7 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC26.4■■□□□ 1.82
TRAV19A0A0A6YYK7 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
TRAV19A0A0A6YYK7 AC100797.4-201ENST00000631653 1827 ntBASIC26.4■■□□□ 1.82
TRAV19A0A0A6YYK7 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
TRAV19A0A0A6YYK7 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
TRAV19A0A0A6YYK7 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC26.4■■□□□ 1.82
TRAV19A0A0A6YYK7 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC26.39■■□□□ 1.82
TRAV19A0A0A6YYK7 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.81
TRAV19A0A0A6YYK7 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC26.38■■□□□ 1.81
TRAV19A0A0A6YYK7 AC060814.1-201ENST00000554326 538 ntBASIC26.38■■□□□ 1.81
TRAV19A0A0A6YYK7 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC26.37■■□□□ 1.81
TRAV19A0A0A6YYK7 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC26.37■■□□□ 1.81
TRAV19A0A0A6YYK7 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC26.37■■□□□ 1.81
TRAV19A0A0A6YYK7 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
TRAV19A0A0A6YYK7 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC26.36■■□□□ 1.81
TRAV19A0A0A6YYK7 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC26.35■■□□□ 1.81
TRAV19A0A0A6YYK7 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC26.35■■□□□ 1.81
TRAV19A0A0A6YYK7 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC26.34■■□□□ 1.81
TRAV19A0A0A6YYK7 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC26.34■■□□□ 1.81
TRAV19A0A0A6YYK7 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC26.33■■□□□ 1.81
TRAV19A0A0A6YYK7 AL139393.2-201ENST00000608721 2025 ntBASIC26.33■■□□□ 1.81
TRAV19A0A0A6YYK7 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
TRAV19A0A0A6YYK7 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC26.33■■□□□ 1.8
TRAV19A0A0A6YYK7 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
TRAV19A0A0A6YYK7 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
TRAV19A0A0A6YYK7 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
TRAV19A0A0A6YYK7 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
TRAV19A0A0A6YYK7 AC126177.7-201ENST00000547904 679 ntBASIC26.31■■□□□ 1.8
TRAV19A0A0A6YYK7 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
TRAV19A0A0A6YYK7 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
TRAV19A0A0A6YYK7 ST7-205ENST00000393446 2114 ntTSL 5 BASIC26.3■■□□□ 1.8
TRAV19A0A0A6YYK7 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC26.3■■□□□ 1.8
TRAV19A0A0A6YYK7 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
TRAV19A0A0A6YYK7 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC26.3■■□□□ 1.8
TRAV19A0A0A6YYK7 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
TRAV19A0A0A6YYK7 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC26.3■■□□□ 1.8
TRAV19A0A0A6YYK7 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC26.3■■□□□ 1.8
TRAV19A0A0A6YYK7 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
TRAV19A0A0A6YYK7 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
TRAV19A0A0A6YYK7 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC26.29■■□□□ 1.8
TRAV19A0A0A6YYK7 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC26.29■■□□□ 1.8
TRAV19A0A0A6YYK7 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
TRAV19A0A0A6YYK7 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
TRAV19A0A0A6YYK7 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC26.28■■□□□ 1.8
TRAV19A0A0A6YYK7 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC26.28■■□□□ 1.8
TRAV19A0A0A6YYK7 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC26.27■■□□□ 1.8
TRAV19A0A0A6YYK7 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
TRAV19A0A0A6YYK7 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
TRAV19A0A0A6YYK7 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC26.27■■□□□ 1.8
TRAV19A0A0A6YYK7 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC26.27■■□□□ 1.8
TRAV19A0A0A6YYK7 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
Retrieved 100 of 98,524 protein–RNA pairs in 15.3 ms