Protein–RNA interactions for Protein: A0A075B6N2

TRBV20-1, T-cell receptor beta variable 20-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV20-1A0A075B6N2 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRBV20-1A0A075B6N2 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
TRBV20-1A0A075B6N2 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TRBV20-1A0A075B6N2 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
TRBV20-1A0A075B6N2 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
TRBV20-1A0A075B6N2 AC012676.1-201ENST00000574705 1949 ntBASIC17.06■□□□□ 0.32
TRBV20-1A0A075B6N2 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
TRBV20-1A0A075B6N2 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRBV20-1A0A075B6N2 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRBV20-1A0A075B6N2 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRBV20-1A0A075B6N2 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
TRBV20-1A0A075B6N2 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
TRBV20-1A0A075B6N2 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRBV20-1A0A075B6N2 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
TRBV20-1A0A075B6N2 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRBV20-1A0A075B6N2 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRBV20-1A0A075B6N2 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC17.03■□□□□ 0.32
TRBV20-1A0A075B6N2 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TRBV20-1A0A075B6N2 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC17.02■□□□□ 0.32
TRBV20-1A0A075B6N2 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
TRBV20-1A0A075B6N2 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TRBV20-1A0A075B6N2 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TRBV20-1A0A075B6N2 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TRBV20-1A0A075B6N2 AC145676.1-201ENST00000514988 2004 ntBASIC17.02■□□□□ 0.32
TRBV20-1A0A075B6N2 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
TRBV20-1A0A075B6N2 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRBV20-1A0A075B6N2 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRBV20-1A0A075B6N2 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
TRBV20-1A0A075B6N2 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRBV20-1A0A075B6N2 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRBV20-1A0A075B6N2 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
TRBV20-1A0A075B6N2 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRBV20-1A0A075B6N2 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC17■□□□□ 0.31
TRBV20-1A0A075B6N2 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC17■□□□□ 0.31
TRBV20-1A0A075B6N2 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC17■□□□□ 0.31
TRBV20-1A0A075B6N2 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC17■□□□□ 0.31
TRBV20-1A0A075B6N2 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
TRBV20-1A0A075B6N2 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRBV20-1A0A075B6N2 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRBV20-1A0A075B6N2 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRBV20-1A0A075B6N2 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRBV20-1A0A075B6N2 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC16.98■□□□□ 0.31
TRBV20-1A0A075B6N2 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
TRBV20-1A0A075B6N2 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC16.98■□□□□ 0.31
TRBV20-1A0A075B6N2 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRBV20-1A0A075B6N2 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRBV20-1A0A075B6N2 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRBV20-1A0A075B6N2 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
TRBV20-1A0A075B6N2 AL136373.1-201ENST00000634804 1449 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
TRBV20-1A0A075B6N2 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRBV20-1A0A075B6N2 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRBV20-1A0A075B6N2 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRBV20-1A0A075B6N2 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC16.95■□□□□ 0.3
TRBV20-1A0A075B6N2 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRBV20-1A0A075B6N2 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC16.95■□□□□ 0.3
TRBV20-1A0A075B6N2 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC16.95■□□□□ 0.3
TRBV20-1A0A075B6N2 AC133561.1-201ENST00000568600 2415 ntBASIC16.95■□□□□ 0.3
TRBV20-1A0A075B6N2 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRBV20-1A0A075B6N2 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC16.95■□□□□ 0.3
TRBV20-1A0A075B6N2 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRBV20-1A0A075B6N2 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
TRBV20-1A0A075B6N2 HAGHL-204ENST00000549114 1820 ntTSL 5 BASIC16.95■□□□□ 0.3
TRBV20-1A0A075B6N2 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRBV20-1A0A075B6N2 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC16.94■□□□□ 0.3
TRBV20-1A0A075B6N2 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRBV20-1A0A075B6N2 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRBV20-1A0A075B6N2 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
TRBV20-1A0A075B6N2 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC16.94■□□□□ 0.3
TRBV20-1A0A075B6N2 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
TRBV20-1A0A075B6N2 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRBV20-1A0A075B6N2 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRBV20-1A0A075B6N2 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRBV20-1A0A075B6N2 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRBV20-1A0A075B6N2 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRBV20-1A0A075B6N2 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRBV20-1A0A075B6N2 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRBV20-1A0A075B6N2 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRBV20-1A0A075B6N2 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC16.92■□□□□ 0.3
TRBV20-1A0A075B6N2 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRBV20-1A0A075B6N2 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRBV20-1A0A075B6N2 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
TRBV20-1A0A075B6N2 SSSCA1-205ENST00000527920 806 ntTSL 3 BASIC16.92■□□□□ 0.3
TRBV20-1A0A075B6N2 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRBV20-1A0A075B6N2 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
TRBV20-1A0A075B6N2 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRBV20-1A0A075B6N2 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRBV20-1A0A075B6N2 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRBV20-1A0A075B6N2 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRBV20-1A0A075B6N2 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
TRBV20-1A0A075B6N2 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
TRBV20-1A0A075B6N2 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRBV20-1A0A075B6N2 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC16.91■□□□□ 0.3
TRBV20-1A0A075B6N2 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRBV20-1A0A075B6N2 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
TRBV20-1A0A075B6N2 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRBV20-1A0A075B6N2 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRBV20-1A0A075B6N2 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
TRBV20-1A0A075B6N2 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
TRBV20-1A0A075B6N2 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRBV20-1A0A075B6N2 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC16.9■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 129.9 ms