Protein–RNA interactions for Protein: Q9Y6B7

AP4B1, AP-4 complex subunit beta-1, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4B1Q9Y6B7 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
AP4B1Q9Y6B7 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
AP4B1Q9Y6B7 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC18.36■□□□□ 0.53
AP4B1Q9Y6B7 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
AP4B1Q9Y6B7 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
AP4B1Q9Y6B7 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC18.36■□□□□ 0.53
AP4B1Q9Y6B7 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
AP4B1Q9Y6B7 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC18.36■□□□□ 0.53
AP4B1Q9Y6B7 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC18.36■□□□□ 0.53
AP4B1Q9Y6B7 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
AP4B1Q9Y6B7 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC18.36■□□□□ 0.53
AP4B1Q9Y6B7 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC18.36■□□□□ 0.53
AP4B1Q9Y6B7 OR2A1-AS1-201ENST00000462305 773 ntBASIC18.36■□□□□ 0.53
AP4B1Q9Y6B7 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC18.36■□□□□ 0.53
AP4B1Q9Y6B7 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC18.36■□□□□ 0.53
AP4B1Q9Y6B7 BET1L-207ENST00000529614 560 ntTSL 5 BASIC18.36■□□□□ 0.53
AP4B1Q9Y6B7 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC18.36■□□□□ 0.53
AP4B1Q9Y6B7 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
AP4B1Q9Y6B7 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC18.36■□□□□ 0.53
AP4B1Q9Y6B7 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC18.36■□□□□ 0.53
AP4B1Q9Y6B7 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC18.36■□□□□ 0.53
AP4B1Q9Y6B7 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC18.36■□□□□ 0.53
AP4B1Q9Y6B7 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
AP4B1Q9Y6B7 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
AP4B1Q9Y6B7 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
AP4B1Q9Y6B7 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC18.35■□□□□ 0.53
AP4B1Q9Y6B7 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
AP4B1Q9Y6B7 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
AP4B1Q9Y6B7 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC18.35■□□□□ 0.53
AP4B1Q9Y6B7 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC18.35■□□□□ 0.53
AP4B1Q9Y6B7 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
AP4B1Q9Y6B7 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
AP4B1Q9Y6B7 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC18.35■□□□□ 0.53
AP4B1Q9Y6B7 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
AP4B1Q9Y6B7 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC18.35■□□□□ 0.53
AP4B1Q9Y6B7 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
AP4B1Q9Y6B7 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
AP4B1Q9Y6B7 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
AP4B1Q9Y6B7 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
AP4B1Q9Y6B7 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC18.35■□□□□ 0.53
AP4B1Q9Y6B7 DENND3-207ENST00000518347 850 ntTSL 2 BASIC18.35■□□□□ 0.53
AP4B1Q9Y6B7 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
AP4B1Q9Y6B7 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
AP4B1Q9Y6B7 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC18.35■□□□□ 0.53
AP4B1Q9Y6B7 KLF13-207ENST00000560473 489 ntTSL 3 BASIC18.35■□□□□ 0.53
AP4B1Q9Y6B7 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC18.35■□□□□ 0.53
AP4B1Q9Y6B7 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
AP4B1Q9Y6B7 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC18.35■□□□□ 0.53
AP4B1Q9Y6B7 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC18.35■□□□□ 0.53
AP4B1Q9Y6B7 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
AP4B1Q9Y6B7 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC18.35■□□□□ 0.53
AP4B1Q9Y6B7 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC18.35■□□□□ 0.53
AP4B1Q9Y6B7 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
AP4B1Q9Y6B7 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
AP4B1Q9Y6B7 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
AP4B1Q9Y6B7 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
AP4B1Q9Y6B7 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
AP4B1Q9Y6B7 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
AP4B1Q9Y6B7 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC18.34■□□□□ 0.53
AP4B1Q9Y6B7 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC18.34■□□□□ 0.53
AP4B1Q9Y6B7 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC18.34■□□□□ 0.53
AP4B1Q9Y6B7 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC18.34■□□□□ 0.53
AP4B1Q9Y6B7 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
AP4B1Q9Y6B7 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
AP4B1Q9Y6B7 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
AP4B1Q9Y6B7 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
AP4B1Q9Y6B7 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
AP4B1Q9Y6B7 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC18.34■□□□□ 0.53
AP4B1Q9Y6B7 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC18.34■□□□□ 0.53
AP4B1Q9Y6B7 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC18.34■□□□□ 0.53
AP4B1Q9Y6B7 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
AP4B1Q9Y6B7 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
AP4B1Q9Y6B7 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
AP4B1Q9Y6B7 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
AP4B1Q9Y6B7 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
AP4B1Q9Y6B7 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
AP4B1Q9Y6B7 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
AP4B1Q9Y6B7 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC18.34■□□□□ 0.53
AP4B1Q9Y6B7 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC18.34■□□□□ 0.53
AP4B1Q9Y6B7 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
AP4B1Q9Y6B7 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC18.34■□□□□ 0.53
AP4B1Q9Y6B7 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
AP4B1Q9Y6B7 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC18.34■□□□□ 0.53
AP4B1Q9Y6B7 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
AP4B1Q9Y6B7 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
AP4B1Q9Y6B7 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.53
AP4B1Q9Y6B7 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC18.33■□□□□ 0.53
AP4B1Q9Y6B7 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
AP4B1Q9Y6B7 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
AP4B1Q9Y6B7 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
AP4B1Q9Y6B7 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
AP4B1Q9Y6B7 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
AP4B1Q9Y6B7 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC18.33■□□□□ 0.53
AP4B1Q9Y6B7 EFTUD1P1-204ENST00000560401 1798 ntBASIC18.33■□□□□ 0.53
AP4B1Q9Y6B7 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
AP4B1Q9Y6B7 NME6-213ENST00000451657 871 ntTSL 2 BASIC18.33■□□□□ 0.52
AP4B1Q9Y6B7 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
AP4B1Q9Y6B7 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
AP4B1Q9Y6B7 KRT18P6-201ENST00000555540 1265 ntBASIC18.33■□□□□ 0.52
AP4B1Q9Y6B7 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC18.33■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms