Protein–RNA interactions for Protein: Q9Y5G7

PCDHGA6, Protocadherin gamma-A6, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA6Q9Y5G7 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC18.44■□□□□ 0.54
PCDHGA6Q9Y5G7 ABBA01031674.1-201ENST00000635145 728 ntBASIC18.44■□□□□ 0.54
PCDHGA6Q9Y5G7 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC18.44■□□□□ 0.54
PCDHGA6Q9Y5G7 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
PCDHGA6Q9Y5G7 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
PCDHGA6Q9Y5G7 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PCDHGA6Q9Y5G7 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC18.44■□□□□ 0.54
PCDHGA6Q9Y5G7 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PCDHGA6Q9Y5G7 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PCDHGA6Q9Y5G7 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC18.44■□□□□ 0.54
PCDHGA6Q9Y5G7 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PCDHGA6Q9Y5G7 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC18.43■□□□□ 0.54
PCDHGA6Q9Y5G7 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PCDHGA6Q9Y5G7 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC18.43■□□□□ 0.54
PCDHGA6Q9Y5G7 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC18.43■□□□□ 0.54
PCDHGA6Q9Y5G7 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
PCDHGA6Q9Y5G7 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PCDHGA6Q9Y5G7 TREX1-205ENST00000625293 1783 ntBASIC18.43■□□□□ 0.54
PCDHGA6Q9Y5G7 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC18.43■□□□□ 0.54
PCDHGA6Q9Y5G7 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
PCDHGA6Q9Y5G7 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PCDHGA6Q9Y5G7 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC18.43■□□□□ 0.54
PCDHGA6Q9Y5G7 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PCDHGA6Q9Y5G7 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC18.43■□□□□ 0.54
PCDHGA6Q9Y5G7 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
PCDHGA6Q9Y5G7 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
PCDHGA6Q9Y5G7 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
PCDHGA6Q9Y5G7 AC004980.1-204ENST00000429707 299 ntBASIC18.43■□□□□ 0.54
PCDHGA6Q9Y5G7 AL137013.1-201ENST00000432946 1228 ntBASIC18.43■□□□□ 0.54
PCDHGA6Q9Y5G7 B3GAT3P1-201ENST00000471720 806 ntBASIC18.43■□□□□ 0.54
PCDHGA6Q9Y5G7 TMA16-209ENST00000513272 803 ntTSL 2 BASIC18.43■□□□□ 0.54
PCDHGA6Q9Y5G7 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC18.43■□□□□ 0.54
PCDHGA6Q9Y5G7 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC18.43■□□□□ 0.54
PCDHGA6Q9Y5G7 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC18.43■□□□□ 0.54
PCDHGA6Q9Y5G7 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC18.43■□□□□ 0.54
PCDHGA6Q9Y5G7 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
PCDHGA6Q9Y5G7 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PCDHGA6Q9Y5G7 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
PCDHGA6Q9Y5G7 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
PCDHGA6Q9Y5G7 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PCDHGA6Q9Y5G7 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PCDHGA6Q9Y5G7 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
PCDHGA6Q9Y5G7 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC18.43■□□□□ 0.54
PCDHGA6Q9Y5G7 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PCDHGA6Q9Y5G7 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PCDHGA6Q9Y5G7 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PCDHGA6Q9Y5G7 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
PCDHGA6Q9Y5G7 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC18.42■□□□□ 0.54
PCDHGA6Q9Y5G7 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC18.42■□□□□ 0.54
PCDHGA6Q9Y5G7 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
PCDHGA6Q9Y5G7 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
PCDHGA6Q9Y5G7 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
PCDHGA6Q9Y5G7 CBFB-203ENST00000561924 584 ntTSL 5 BASIC18.42■□□□□ 0.54
PCDHGA6Q9Y5G7 C2orf69P3-201ENST00000565542 1120 ntBASIC18.42■□□□□ 0.54
PCDHGA6Q9Y5G7 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC18.42■□□□□ 0.54
PCDHGA6Q9Y5G7 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC18.42■□□□□ 0.54
PCDHGA6Q9Y5G7 AC131212.4-201ENST00000623606 975 ntBASIC18.42■□□□□ 0.54
PCDHGA6Q9Y5G7 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC18.42■□□□□ 0.54
PCDHGA6Q9Y5G7 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
PCDHGA6Q9Y5G7 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
PCDHGA6Q9Y5G7 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
PCDHGA6Q9Y5G7 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PCDHGA6Q9Y5G7 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PCDHGA6Q9Y5G7 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PCDHGA6Q9Y5G7 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
PCDHGA6Q9Y5G7 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC18.42■□□□□ 0.54
PCDHGA6Q9Y5G7 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
PCDHGA6Q9Y5G7 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
PCDHGA6Q9Y5G7 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
PCDHGA6Q9Y5G7 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PCDHGA6Q9Y5G7 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PCDHGA6Q9Y5G7 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
PCDHGA6Q9Y5G7 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC18.41■□□□□ 0.54
PCDHGA6Q9Y5G7 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC18.41■□□□□ 0.54
PCDHGA6Q9Y5G7 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PCDHGA6Q9Y5G7 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
PCDHGA6Q9Y5G7 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC18.41■□□□□ 0.54
PCDHGA6Q9Y5G7 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
PCDHGA6Q9Y5G7 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC18.41■□□□□ 0.54
PCDHGA6Q9Y5G7 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
PCDHGA6Q9Y5G7 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PCDHGA6Q9Y5G7 ARMC10P1-201ENST00000313754 855 ntBASIC18.41■□□□□ 0.54
PCDHGA6Q9Y5G7 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC18.41■□□□□ 0.54
PCDHGA6Q9Y5G7 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC18.41■□□□□ 0.54
PCDHGA6Q9Y5G7 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC18.41■□□□□ 0.54
PCDHGA6Q9Y5G7 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC18.41■□□□□ 0.54
PCDHGA6Q9Y5G7 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC18.41■□□□□ 0.54
PCDHGA6Q9Y5G7 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
PCDHGA6Q9Y5G7 EGLN1P1-201ENST00000531623 762 ntBASIC18.41■□□□□ 0.54
PCDHGA6Q9Y5G7 NME3-204ENST00000563498 920 ntTSL 2 BASIC18.41■□□□□ 0.54
PCDHGA6Q9Y5G7 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
PCDHGA6Q9Y5G7 CLN6-221ENST00000637494 765 ntTSL 5 BASIC18.41■□□□□ 0.54
PCDHGA6Q9Y5G7 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC18.41■□□□□ 0.54
PCDHGA6Q9Y5G7 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PCDHGA6Q9Y5G7 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
PCDHGA6Q9Y5G7 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PCDHGA6Q9Y5G7 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC18.41■□□□□ 0.54
PCDHGA6Q9Y5G7 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
PCDHGA6Q9Y5G7 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
PCDHGA6Q9Y5G7 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms