Protein–RNA interactions for Protein: Q9Y587

AP4S1, AP-4 complex subunit sigma-1, humanhuman

Predictions only

Length 144 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4S1Q9Y587 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
AP4S1Q9Y587 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC18.11■□□□□ 0.49
AP4S1Q9Y587 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
AP4S1Q9Y587 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
AP4S1Q9Y587 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
AP4S1Q9Y587 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
AP4S1Q9Y587 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
AP4S1Q9Y587 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
AP4S1Q9Y587 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
AP4S1Q9Y587 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
AP4S1Q9Y587 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
AP4S1Q9Y587 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
AP4S1Q9Y587 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
AP4S1Q9Y587 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
AP4S1Q9Y587 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
AP4S1Q9Y587 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC18.1■□□□□ 0.49
AP4S1Q9Y587 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
AP4S1Q9Y587 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
AP4S1Q9Y587 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
AP4S1Q9Y587 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
AP4S1Q9Y587 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
AP4S1Q9Y587 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
AP4S1Q9Y587 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC18.1■□□□□ 0.49
AP4S1Q9Y587 RHOF-204ENST00000537265 699 ntTSL 2 BASIC18.1■□□□□ 0.49
AP4S1Q9Y587 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC18.1■□□□□ 0.49
AP4S1Q9Y587 TERF1P2-201ENST00000583350 1212 ntBASIC18.1■□□□□ 0.49
AP4S1Q9Y587 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
AP4S1Q9Y587 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC18.1■□□□□ 0.49
AP4S1Q9Y587 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
AP4S1Q9Y587 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
AP4S1Q9Y587 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
AP4S1Q9Y587 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
AP4S1Q9Y587 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
AP4S1Q9Y587 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
AP4S1Q9Y587 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
AP4S1Q9Y587 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
AP4S1Q9Y587 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
AP4S1Q9Y587 ANO7L1-203ENST00000602586 1720 ntBASIC18.09■□□□□ 0.49
AP4S1Q9Y587 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
AP4S1Q9Y587 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC18.09■□□□□ 0.49
AP4S1Q9Y587 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
AP4S1Q9Y587 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC18.09■□□□□ 0.49
AP4S1Q9Y587 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC18.09■□□□□ 0.49
AP4S1Q9Y587 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
AP4S1Q9Y587 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC18.09■□□□□ 0.49
AP4S1Q9Y587 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
AP4S1Q9Y587 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC18.09■□□□□ 0.49
AP4S1Q9Y587 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC18.09■□□□□ 0.49
AP4S1Q9Y587 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
AP4S1Q9Y587 AC027612.3-201ENST00000413684 1047 ntBASIC18.09■□□□□ 0.49
AP4S1Q9Y587 PBX1-209ENST00000485769 834 ntTSL 2 BASIC18.09■□□□□ 0.49
AP4S1Q9Y587 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
AP4S1Q9Y587 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC18.09■□□□□ 0.49
AP4S1Q9Y587 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
AP4S1Q9Y587 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC18.09■□□□□ 0.49
AP4S1Q9Y587 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
AP4S1Q9Y587 MFSD11-216ENST00000590393 1141 ntBASIC18.09■□□□□ 0.49
AP4S1Q9Y587 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
AP4S1Q9Y587 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
AP4S1Q9Y587 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
AP4S1Q9Y587 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
AP4S1Q9Y587 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
AP4S1Q9Y587 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC18.09■□□□□ 0.49
AP4S1Q9Y587 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC18.09■□□□□ 0.49
AP4S1Q9Y587 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
AP4S1Q9Y587 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
AP4S1Q9Y587 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
AP4S1Q9Y587 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
AP4S1Q9Y587 HTR7P1-202ENST00000624664 4411 ntBASIC18.08■□□□□ 0.49
AP4S1Q9Y587 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC18.08■□□□□ 0.49
AP4S1Q9Y587 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
AP4S1Q9Y587 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC18.08■□□□□ 0.49
AP4S1Q9Y587 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
AP4S1Q9Y587 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
AP4S1Q9Y587 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.49
AP4S1Q9Y587 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC18.08■□□□□ 0.49
AP4S1Q9Y587 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
AP4S1Q9Y587 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
AP4S1Q9Y587 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
AP4S1Q9Y587 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC18.08■□□□□ 0.48
AP4S1Q9Y587 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
AP4S1Q9Y587 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
AP4S1Q9Y587 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC18.08■□□□□ 0.48
AP4S1Q9Y587 COX20-201ENST00000366528 568 ntTSL 2 BASIC18.08■□□□□ 0.48
AP4S1Q9Y587 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
AP4S1Q9Y587 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC18.08■□□□□ 0.48
AP4S1Q9Y587 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
AP4S1Q9Y587 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
AP4S1Q9Y587 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC18.08■□□□□ 0.48
AP4S1Q9Y587 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
AP4S1Q9Y587 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
AP4S1Q9Y587 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
AP4S1Q9Y587 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
AP4S1Q9Y587 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
AP4S1Q9Y587 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
AP4S1Q9Y587 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
AP4S1Q9Y587 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
AP4S1Q9Y587 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC18.08■□□□□ 0.48
AP4S1Q9Y587 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
AP4S1Q9Y587 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms