Protein–RNA interactions for Protein: Q9Y2S0

POLR1D, DNA-directed RNA polymerases I and III subunit RPAC2, humanhuman

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1DQ9Y2S0 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
POLR1DQ9Y2S0 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
POLR1DQ9Y2S0 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
POLR1DQ9Y2S0 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC17.1■□□□□ 0.33
POLR1DQ9Y2S0 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
POLR1DQ9Y2S0 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
POLR1DQ9Y2S0 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
POLR1DQ9Y2S0 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
POLR1DQ9Y2S0 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
POLR1DQ9Y2S0 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
POLR1DQ9Y2S0 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
POLR1DQ9Y2S0 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
POLR1DQ9Y2S0 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
POLR1DQ9Y2S0 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC17.1■□□□□ 0.33
POLR1DQ9Y2S0 AP003097.1-201ENST00000530657 1135 ntBASIC17.1■□□□□ 0.33
POLR1DQ9Y2S0 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC17.1■□□□□ 0.33
POLR1DQ9Y2S0 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC17.1■□□□□ 0.33
POLR1DQ9Y2S0 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC17.1■□□□□ 0.33
POLR1DQ9Y2S0 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC17.1■□□□□ 0.33
POLR1DQ9Y2S0 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
POLR1DQ9Y2S0 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
POLR1DQ9Y2S0 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
POLR1DQ9Y2S0 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC17.1■□□□□ 0.33
POLR1DQ9Y2S0 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
POLR1DQ9Y2S0 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
POLR1DQ9Y2S0 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC17.1■□□□□ 0.33
POLR1DQ9Y2S0 BX323043.1-201ENST00000641006 1765 ntBASIC17.1■□□□□ 0.33
POLR1DQ9Y2S0 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
POLR1DQ9Y2S0 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC17.1■□□□□ 0.33
POLR1DQ9Y2S0 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
POLR1DQ9Y2S0 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC17.09■□□□□ 0.33
POLR1DQ9Y2S0 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
POLR1DQ9Y2S0 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC17.09■□□□□ 0.33
POLR1DQ9Y2S0 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC17.09■□□□□ 0.33
POLR1DQ9Y2S0 GAS7-202ENST00000396115 929 ntTSL 5 BASIC17.09■□□□□ 0.33
POLR1DQ9Y2S0 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
POLR1DQ9Y2S0 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC17.09■□□□□ 0.33
POLR1DQ9Y2S0 THEM4-205ENST00000489410 643 ntTSL 2 BASIC17.09■□□□□ 0.33
POLR1DQ9Y2S0 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC17.09■□□□□ 0.33
POLR1DQ9Y2S0 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
POLR1DQ9Y2S0 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC17.09■□□□□ 0.33
POLR1DQ9Y2S0 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC17.09■□□□□ 0.33
POLR1DQ9Y2S0 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC17.09■□□□□ 0.33
POLR1DQ9Y2S0 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
POLR1DQ9Y2S0 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC17.09■□□□□ 0.33
POLR1DQ9Y2S0 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC17.09■□□□□ 0.33
POLR1DQ9Y2S0 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC17.09■□□□□ 0.33
POLR1DQ9Y2S0 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC17.09■□□□□ 0.33
POLR1DQ9Y2S0 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC17.09■□□□□ 0.33
POLR1DQ9Y2S0 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC17.09■□□□□ 0.33
POLR1DQ9Y2S0 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
POLR1DQ9Y2S0 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
POLR1DQ9Y2S0 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
POLR1DQ9Y2S0 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
POLR1DQ9Y2S0 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC17.09■□□□□ 0.33
POLR1DQ9Y2S0 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
POLR1DQ9Y2S0 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC17.09■□□□□ 0.33
POLR1DQ9Y2S0 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC17.09■□□□□ 0.33
POLR1DQ9Y2S0 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
POLR1DQ9Y2S0 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
POLR1DQ9Y2S0 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
POLR1DQ9Y2S0 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
POLR1DQ9Y2S0 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
POLR1DQ9Y2S0 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
POLR1DQ9Y2S0 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
POLR1DQ9Y2S0 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC17.08■□□□□ 0.33
POLR1DQ9Y2S0 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC17.08■□□□□ 0.33
POLR1DQ9Y2S0 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
POLR1DQ9Y2S0 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
POLR1DQ9Y2S0 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
POLR1DQ9Y2S0 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
POLR1DQ9Y2S0 AC098818.2-201ENST00000564925 2320 ntBASIC17.08■□□□□ 0.33
POLR1DQ9Y2S0 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
POLR1DQ9Y2S0 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC17.08■□□□□ 0.33
POLR1DQ9Y2S0 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
POLR1DQ9Y2S0 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
POLR1DQ9Y2S0 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
POLR1DQ9Y2S0 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.32
POLR1DQ9Y2S0 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC17.08■□□□□ 0.32
POLR1DQ9Y2S0 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
POLR1DQ9Y2S0 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
POLR1DQ9Y2S0 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
POLR1DQ9Y2S0 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
POLR1DQ9Y2S0 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
POLR1DQ9Y2S0 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC17.08■□□□□ 0.32
POLR1DQ9Y2S0 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC17.08■□□□□ 0.32
POLR1DQ9Y2S0 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC17.08■□□□□ 0.32
POLR1DQ9Y2S0 KLF2-202ENST00000592003 564 ntTSL 3 BASIC17.08■□□□□ 0.32
POLR1DQ9Y2S0 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC17.08■□□□□ 0.32
POLR1DQ9Y2S0 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
POLR1DQ9Y2S0 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
POLR1DQ9Y2S0 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
POLR1DQ9Y2S0 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
POLR1DQ9Y2S0 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
POLR1DQ9Y2S0 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
POLR1DQ9Y2S0 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
POLR1DQ9Y2S0 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
POLR1DQ9Y2S0 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
POLR1DQ9Y2S0 LINC01465-201ENST00000408887 1940 ntBASIC17.08■□□□□ 0.32
POLR1DQ9Y2S0 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms