Protein–RNA interactions for Protein: Q9Y2H6

FNDC3A, Fibronectin type-III domain-containing protein 3A, humanhuman

Known RBP Predictions only

Length 1,198 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3AQ9Y2H6 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
FNDC3AQ9Y2H6 RNF146-204ENST00000476956 884 ntTSL 2 BASIC19.55■□□□□ 0.72
FNDC3AQ9Y2H6 AC116562.2-201ENST00000507042 360 ntBASIC19.55■□□□□ 0.72
FNDC3AQ9Y2H6 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC19.55■□□□□ 0.72
FNDC3AQ9Y2H6 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC19.55■□□□□ 0.72
FNDC3AQ9Y2H6 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC19.55■□□□□ 0.72
FNDC3AQ9Y2H6 TPM1-226ENST00000560959 925 ntTSL 2 BASIC19.55■□□□□ 0.72
FNDC3AQ9Y2H6 NME3-204ENST00000563498 920 ntTSL 2 BASIC19.55■□□□□ 0.72
FNDC3AQ9Y2H6 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC19.55■□□□□ 0.72
FNDC3AQ9Y2H6 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC19.55■□□□□ 0.72
FNDC3AQ9Y2H6 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC19.55■□□□□ 0.72
FNDC3AQ9Y2H6 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
FNDC3AQ9Y2H6 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC19.55■□□□□ 0.72
FNDC3AQ9Y2H6 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
FNDC3AQ9Y2H6 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
FNDC3AQ9Y2H6 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC19.55■□□□□ 0.72
FNDC3AQ9Y2H6 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
FNDC3AQ9Y2H6 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC19.55■□□□□ 0.72
FNDC3AQ9Y2H6 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
FNDC3AQ9Y2H6 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
FNDC3AQ9Y2H6 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC19.54■□□□□ 0.72
FNDC3AQ9Y2H6 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC19.54■□□□□ 0.72
FNDC3AQ9Y2H6 KRT18P22-201ENST00000402024 1347 ntBASIC19.54■□□□□ 0.72
FNDC3AQ9Y2H6 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
FNDC3AQ9Y2H6 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC19.54■□□□□ 0.72
FNDC3AQ9Y2H6 AC007952.6-201ENST00000573168 2673 ntBASIC19.54■□□□□ 0.72
FNDC3AQ9Y2H6 AC003957.1-201ENST00000625108 2673 ntBASIC19.54■□□□□ 0.72
FNDC3AQ9Y2H6 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
FNDC3AQ9Y2H6 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
FNDC3AQ9Y2H6 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
FNDC3AQ9Y2H6 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
FNDC3AQ9Y2H6 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC19.54■□□□□ 0.72
FNDC3AQ9Y2H6 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
FNDC3AQ9Y2H6 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.54■□□□□ 0.72
FNDC3AQ9Y2H6 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
FNDC3AQ9Y2H6 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.54■□□□□ 0.72
FNDC3AQ9Y2H6 AL137013.1-201ENST00000432946 1228 ntBASIC19.54■□□□□ 0.72
FNDC3AQ9Y2H6 YBX1P10-201ENST00000444752 975 ntBASIC19.54■□□□□ 0.72
FNDC3AQ9Y2H6 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.54■□□□□ 0.72
FNDC3AQ9Y2H6 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC19.54■□□□□ 0.72
FNDC3AQ9Y2H6 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC19.54■□□□□ 0.72
FNDC3AQ9Y2H6 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
FNDC3AQ9Y2H6 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
FNDC3AQ9Y2H6 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
FNDC3AQ9Y2H6 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
FNDC3AQ9Y2H6 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
FNDC3AQ9Y2H6 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
FNDC3AQ9Y2H6 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
FNDC3AQ9Y2H6 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
FNDC3AQ9Y2H6 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC19.54■□□□□ 0.72
FNDC3AQ9Y2H6 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
FNDC3AQ9Y2H6 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
FNDC3AQ9Y2H6 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
FNDC3AQ9Y2H6 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
FNDC3AQ9Y2H6 KRT16P1-201ENST00000399124 1418 ntBASIC19.53■□□□□ 0.72
FNDC3AQ9Y2H6 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
FNDC3AQ9Y2H6 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
FNDC3AQ9Y2H6 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
FNDC3AQ9Y2H6 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC19.53■□□□□ 0.72
FNDC3AQ9Y2H6 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC19.53■□□□□ 0.72
FNDC3AQ9Y2H6 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC19.53■□□□□ 0.72
FNDC3AQ9Y2H6 RBM42-202ENST00000586618 771 ntTSL 3 BASIC19.53■□□□□ 0.72
FNDC3AQ9Y2H6 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC19.53■□□□□ 0.72
FNDC3AQ9Y2H6 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
FNDC3AQ9Y2H6 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
FNDC3AQ9Y2H6 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
FNDC3AQ9Y2H6 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
FNDC3AQ9Y2H6 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC19.53■□□□□ 0.72
FNDC3AQ9Y2H6 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
FNDC3AQ9Y2H6 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
FNDC3AQ9Y2H6 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC19.52■□□□□ 0.72
FNDC3AQ9Y2H6 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC19.52■□□□□ 0.72
FNDC3AQ9Y2H6 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC19.52■□□□□ 0.72
FNDC3AQ9Y2H6 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
FNDC3AQ9Y2H6 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC19.52■□□□□ 0.72
FNDC3AQ9Y2H6 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC19.52■□□□□ 0.72
FNDC3AQ9Y2H6 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
FNDC3AQ9Y2H6 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
FNDC3AQ9Y2H6 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC19.52■□□□□ 0.72
FNDC3AQ9Y2H6 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
FNDC3AQ9Y2H6 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC19.52■□□□□ 0.72
FNDC3AQ9Y2H6 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
FNDC3AQ9Y2H6 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
FNDC3AQ9Y2H6 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC19.52■□□□□ 0.72
FNDC3AQ9Y2H6 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC19.52■□□□□ 0.72
FNDC3AQ9Y2H6 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
FNDC3AQ9Y2H6 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC19.52■□□□□ 0.72
FNDC3AQ9Y2H6 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC19.52■□□□□ 0.72
FNDC3AQ9Y2H6 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC19.52■□□□□ 0.72
FNDC3AQ9Y2H6 TMA16-209ENST00000513272 803 ntTSL 2 BASIC19.52■□□□□ 0.72
FNDC3AQ9Y2H6 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC19.52■□□□□ 0.72
FNDC3AQ9Y2H6 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC19.52■□□□□ 0.72
FNDC3AQ9Y2H6 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC19.52■□□□□ 0.72
FNDC3AQ9Y2H6 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
FNDC3AQ9Y2H6 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
FNDC3AQ9Y2H6 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
FNDC3AQ9Y2H6 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.71
FNDC3AQ9Y2H6 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.71
FNDC3AQ9Y2H6 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
FNDC3AQ9Y2H6 TREX1-205ENST00000625293 1783 ntBASIC19.52■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms