Protein–RNA interactions for Protein: Q9NZQ3

NCKIPSD, NCK-interacting protein with SH3 domain, humanhuman

Predictions only

Length 722 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSDQ9NZQ3 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
NCKIPSDQ9NZQ3 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
NCKIPSDQ9NZQ3 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
NCKIPSDQ9NZQ3 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
NCKIPSDQ9NZQ3 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC19.36■□□□□ 0.69
NCKIPSDQ9NZQ3 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
NCKIPSDQ9NZQ3 CALM3-202ENST00000391918 702 ntTSL 2 BASIC19.36■□□□□ 0.69
NCKIPSDQ9NZQ3 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC19.36■□□□□ 0.69
NCKIPSDQ9NZQ3 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC19.36■□□□□ 0.69
NCKIPSDQ9NZQ3 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
NCKIPSDQ9NZQ3 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC19.36■□□□□ 0.69
NCKIPSDQ9NZQ3 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
NCKIPSDQ9NZQ3 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
NCKIPSDQ9NZQ3 PPOX-219ENST00000544598 813 ntTSL 2 BASIC19.36■□□□□ 0.69
NCKIPSDQ9NZQ3 TK2-213ENST00000563369 882 ntTSL 5 BASIC19.36■□□□□ 0.69
NCKIPSDQ9NZQ3 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC19.36■□□□□ 0.69
NCKIPSDQ9NZQ3 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
NCKIPSDQ9NZQ3 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC19.36■□□□□ 0.69
NCKIPSDQ9NZQ3 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC19.36■□□□□ 0.69
NCKIPSDQ9NZQ3 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
NCKIPSDQ9NZQ3 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
NCKIPSDQ9NZQ3 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
NCKIPSDQ9NZQ3 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
NCKIPSDQ9NZQ3 AC004408.2-201ENST00000623613 2777 ntBASIC19.36■□□□□ 0.69
NCKIPSDQ9NZQ3 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC19.36■□□□□ 0.69
NCKIPSDQ9NZQ3 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC19.36■□□□□ 0.69
NCKIPSDQ9NZQ3 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
NCKIPSDQ9NZQ3 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
NCKIPSDQ9NZQ3 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
NCKIPSDQ9NZQ3 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
NCKIPSDQ9NZQ3 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
NCKIPSDQ9NZQ3 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
NCKIPSDQ9NZQ3 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
NCKIPSDQ9NZQ3 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
NCKIPSDQ9NZQ3 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
NCKIPSDQ9NZQ3 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
NCKIPSDQ9NZQ3 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
NCKIPSDQ9NZQ3 UNC93B2-201ENST00000285383 730 ntBASIC19.35■□□□□ 0.69
NCKIPSDQ9NZQ3 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC19.35■□□□□ 0.69
NCKIPSDQ9NZQ3 KSR1P1-201ENST00000446298 240 ntBASIC19.35■□□□□ 0.69
NCKIPSDQ9NZQ3 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
NCKIPSDQ9NZQ3 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC19.35■□□□□ 0.69
NCKIPSDQ9NZQ3 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
NCKIPSDQ9NZQ3 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
NCKIPSDQ9NZQ3 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
NCKIPSDQ9NZQ3 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC19.35■□□□□ 0.69
NCKIPSDQ9NZQ3 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
NCKIPSDQ9NZQ3 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
NCKIPSDQ9NZQ3 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC19.35■□□□□ 0.69
NCKIPSDQ9NZQ3 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC19.34■□□□□ 0.69
NCKIPSDQ9NZQ3 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC19.34■□□□□ 0.69
NCKIPSDQ9NZQ3 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
NCKIPSDQ9NZQ3 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
NCKIPSDQ9NZQ3 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
NCKIPSDQ9NZQ3 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
NCKIPSDQ9NZQ3 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
NCKIPSDQ9NZQ3 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
NCKIPSDQ9NZQ3 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
NCKIPSDQ9NZQ3 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
NCKIPSDQ9NZQ3 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
NCKIPSDQ9NZQ3 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
NCKIPSDQ9NZQ3 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
NCKIPSDQ9NZQ3 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC19.34■□□□□ 0.69
NCKIPSDQ9NZQ3 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC19.34■□□□□ 0.69
NCKIPSDQ9NZQ3 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC19.34■□□□□ 0.69
NCKIPSDQ9NZQ3 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC19.34■□□□□ 0.69
NCKIPSDQ9NZQ3 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
NCKIPSDQ9NZQ3 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
NCKIPSDQ9NZQ3 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
NCKIPSDQ9NZQ3 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
NCKIPSDQ9NZQ3 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC19.34■□□□□ 0.69
NCKIPSDQ9NZQ3 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC19.34■□□□□ 0.69
NCKIPSDQ9NZQ3 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC19.34■□□□□ 0.69
NCKIPSDQ9NZQ3 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
NCKIPSDQ9NZQ3 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
NCKIPSDQ9NZQ3 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC19.33■□□□□ 0.69
NCKIPSDQ9NZQ3 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
NCKIPSDQ9NZQ3 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
NCKIPSDQ9NZQ3 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
NCKIPSDQ9NZQ3 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
NCKIPSDQ9NZQ3 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
NCKIPSDQ9NZQ3 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC19.33■□□□□ 0.69
NCKIPSDQ9NZQ3 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
NCKIPSDQ9NZQ3 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC19.33■□□□□ 0.68
NCKIPSDQ9NZQ3 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC19.33■□□□□ 0.68
NCKIPSDQ9NZQ3 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC19.33■□□□□ 0.68
NCKIPSDQ9NZQ3 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC19.33■□□□□ 0.68
NCKIPSDQ9NZQ3 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC19.33■□□□□ 0.68
NCKIPSDQ9NZQ3 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC19.33■□□□□ 0.68
NCKIPSDQ9NZQ3 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
NCKIPSDQ9NZQ3 GLDC-219ENST00000640208 420 ntTSL 2 BASIC19.33■□□□□ 0.68
NCKIPSDQ9NZQ3 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
NCKIPSDQ9NZQ3 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
NCKIPSDQ9NZQ3 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
NCKIPSDQ9NZQ3 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
NCKIPSDQ9NZQ3 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
NCKIPSDQ9NZQ3 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
NCKIPSDQ9NZQ3 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
NCKIPSDQ9NZQ3 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
NCKIPSDQ9NZQ3 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms