Protein–RNA interactions for Protein: Q9NP66

HMG20A, High mobility group protein 20A, humanhuman

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20AQ9NP66 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
HMG20AQ9NP66 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
HMG20AQ9NP66 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
HMG20AQ9NP66 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
HMG20AQ9NP66 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
HMG20AQ9NP66 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
HMG20AQ9NP66 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
HMG20AQ9NP66 PTPA-214ENST00000423100 988 ntTSL 2 BASIC17.37■□□□□ 0.37
HMG20AQ9NP66 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC17.37■□□□□ 0.37
HMG20AQ9NP66 GALNS-213ENST00000569433 723 ntTSL 3 BASIC17.37■□□□□ 0.37
HMG20AQ9NP66 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC17.37■□□□□ 0.37
HMG20AQ9NP66 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC17.37■□□□□ 0.37
HMG20AQ9NP66 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
HMG20AQ9NP66 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
HMG20AQ9NP66 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
HMG20AQ9NP66 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
HMG20AQ9NP66 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
HMG20AQ9NP66 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
HMG20AQ9NP66 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
HMG20AQ9NP66 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
HMG20AQ9NP66 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
HMG20AQ9NP66 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
HMG20AQ9NP66 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
HMG20AQ9NP66 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC17.36■□□□□ 0.37
HMG20AQ9NP66 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC17.36■□□□□ 0.37
HMG20AQ9NP66 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
HMG20AQ9NP66 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC17.36■□□□□ 0.37
HMG20AQ9NP66 AC243732.1-201ENST00000612648 864 ntBASIC17.36■□□□□ 0.37
HMG20AQ9NP66 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC17.36■□□□□ 0.37
HMG20AQ9NP66 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
HMG20AQ9NP66 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
HMG20AQ9NP66 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC17.36■□□□□ 0.37
HMG20AQ9NP66 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
HMG20AQ9NP66 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC17.36■□□□□ 0.37
HMG20AQ9NP66 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
HMG20AQ9NP66 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
HMG20AQ9NP66 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
HMG20AQ9NP66 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
HMG20AQ9NP66 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
HMG20AQ9NP66 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC17.35■□□□□ 0.37
HMG20AQ9NP66 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HMG20AQ9NP66 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HMG20AQ9NP66 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
HMG20AQ9NP66 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
HMG20AQ9NP66 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
HMG20AQ9NP66 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HMG20AQ9NP66 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
HMG20AQ9NP66 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC17.35■□□□□ 0.37
HMG20AQ9NP66 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC17.35■□□□□ 0.37
HMG20AQ9NP66 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC17.35■□□□□ 0.37
HMG20AQ9NP66 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HMG20AQ9NP66 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC17.35■□□□□ 0.37
HMG20AQ9NP66 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC17.35■□□□□ 0.37
HMG20AQ9NP66 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC17.35■□□□□ 0.37
HMG20AQ9NP66 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
HMG20AQ9NP66 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC17.35■□□□□ 0.37
HMG20AQ9NP66 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC17.35■□□□□ 0.37
HMG20AQ9NP66 FGF8-207ENST00000618991 856 ntTSL 3 BASIC17.35■□□□□ 0.37
HMG20AQ9NP66 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC17.35■□□□□ 0.37
HMG20AQ9NP66 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
HMG20AQ9NP66 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
HMG20AQ9NP66 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
HMG20AQ9NP66 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
HMG20AQ9NP66 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
HMG20AQ9NP66 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
HMG20AQ9NP66 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
HMG20AQ9NP66 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
HMG20AQ9NP66 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC17.35■□□□□ 0.37
HMG20AQ9NP66 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HMG20AQ9NP66 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC17.35■□□□□ 0.37
HMG20AQ9NP66 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
HMG20AQ9NP66 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC17.35■□□□□ 0.37
HMG20AQ9NP66 CD276-203ENST00000537340 2439 ntTSL 2 BASIC17.35■□□□□ 0.37
HMG20AQ9NP66 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HMG20AQ9NP66 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
HMG20AQ9NP66 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
HMG20AQ9NP66 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
HMG20AQ9NP66 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC17.34■□□□□ 0.37
HMG20AQ9NP66 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
HMG20AQ9NP66 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
HMG20AQ9NP66 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
HMG20AQ9NP66 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
HMG20AQ9NP66 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC17.34■□□□□ 0.37
HMG20AQ9NP66 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
HMG20AQ9NP66 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
HMG20AQ9NP66 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC17.34■□□□□ 0.37
HMG20AQ9NP66 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
HMG20AQ9NP66 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
HMG20AQ9NP66 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
HMG20AQ9NP66 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
HMG20AQ9NP66 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC17.34■□□□□ 0.37
HMG20AQ9NP66 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
HMG20AQ9NP66 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
HMG20AQ9NP66 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
HMG20AQ9NP66 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC17.34■□□□□ 0.37
HMG20AQ9NP66 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
HMG20AQ9NP66 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC17.34■□□□□ 0.37
HMG20AQ9NP66 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
HMG20AQ9NP66 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
HMG20AQ9NP66 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC17.34■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms