Protein–RNA interactions for Protein: Q9H0A8

COMMD4, COMM domain-containing protein 4, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4Q9H0A8 CRK-204ENST00000574295 1391 ntTSL 5 BASIC16.91■□□□□ 0.3
COMMD4Q9H0A8 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
COMMD4Q9H0A8 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
COMMD4Q9H0A8 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
COMMD4Q9H0A8 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
COMMD4Q9H0A8 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
COMMD4Q9H0A8 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
COMMD4Q9H0A8 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
COMMD4Q9H0A8 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
COMMD4Q9H0A8 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
COMMD4Q9H0A8 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC16.91■□□□□ 0.3
COMMD4Q9H0A8 RER1-204ENST00000378518 522 ntTSL 3 BASIC16.91■□□□□ 0.3
COMMD4Q9H0A8 AC073210.2-201ENST00000430369 194 ntBASIC16.91■□□□□ 0.3
COMMD4Q9H0A8 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC16.91■□□□□ 0.3
COMMD4Q9H0A8 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
COMMD4Q9H0A8 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC16.91■□□□□ 0.3
COMMD4Q9H0A8 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC16.91■□□□□ 0.3
COMMD4Q9H0A8 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC16.91■□□□□ 0.3
COMMD4Q9H0A8 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
COMMD4Q9H0A8 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
COMMD4Q9H0A8 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
COMMD4Q9H0A8 ANKRD18DP-204ENST00000455355 1975 ntBASIC16.91■□□□□ 0.3
COMMD4Q9H0A8 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC16.91■□□□□ 0.3
COMMD4Q9H0A8 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
COMMD4Q9H0A8 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
COMMD4Q9H0A8 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC16.9■□□□□ 0.3
COMMD4Q9H0A8 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
COMMD4Q9H0A8 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
COMMD4Q9H0A8 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC16.9■□□□□ 0.3
COMMD4Q9H0A8 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC16.9■□□□□ 0.3
COMMD4Q9H0A8 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC16.9■□□□□ 0.3
COMMD4Q9H0A8 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
COMMD4Q9H0A8 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
COMMD4Q9H0A8 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
COMMD4Q9H0A8 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
COMMD4Q9H0A8 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
COMMD4Q9H0A8 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
COMMD4Q9H0A8 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
COMMD4Q9H0A8 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
COMMD4Q9H0A8 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
COMMD4Q9H0A8 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
COMMD4Q9H0A8 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
COMMD4Q9H0A8 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
COMMD4Q9H0A8 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC16.9■□□□□ 0.3
COMMD4Q9H0A8 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
COMMD4Q9H0A8 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
COMMD4Q9H0A8 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
COMMD4Q9H0A8 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
COMMD4Q9H0A8 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC16.9■□□□□ 0.3
COMMD4Q9H0A8 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC16.9■□□□□ 0.3
COMMD4Q9H0A8 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC16.9■□□□□ 0.3
COMMD4Q9H0A8 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC16.9■□□□□ 0.3
COMMD4Q9H0A8 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
COMMD4Q9H0A8 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
COMMD4Q9H0A8 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
COMMD4Q9H0A8 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
COMMD4Q9H0A8 AC093525.10-201ENST00000625130 1569 ntBASIC16.89■□□□□ 0.3
COMMD4Q9H0A8 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC16.89■□□□□ 0.3
COMMD4Q9H0A8 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
COMMD4Q9H0A8 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
COMMD4Q9H0A8 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC16.89■□□□□ 0.3
COMMD4Q9H0A8 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
COMMD4Q9H0A8 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
COMMD4Q9H0A8 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
COMMD4Q9H0A8 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC16.89■□□□□ 0.29
COMMD4Q9H0A8 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
COMMD4Q9H0A8 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
COMMD4Q9H0A8 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
COMMD4Q9H0A8 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
COMMD4Q9H0A8 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
COMMD4Q9H0A8 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
COMMD4Q9H0A8 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
COMMD4Q9H0A8 GGT1-206ENST00000404223 952 ntTSL 2 BASIC16.89■□□□□ 0.29
COMMD4Q9H0A8 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC16.89■□□□□ 0.29
COMMD4Q9H0A8 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
COMMD4Q9H0A8 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC16.89■□□□□ 0.29
COMMD4Q9H0A8 AC005829.2-201ENST00000571422 1056 ntBASIC16.89■□□□□ 0.29
COMMD4Q9H0A8 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
COMMD4Q9H0A8 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
COMMD4Q9H0A8 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
COMMD4Q9H0A8 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
COMMD4Q9H0A8 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
COMMD4Q9H0A8 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
COMMD4Q9H0A8 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
COMMD4Q9H0A8 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
COMMD4Q9H0A8 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
COMMD4Q9H0A8 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
COMMD4Q9H0A8 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
COMMD4Q9H0A8 AL031598.1-201ENST00000561511 1773 ntBASIC16.89■□□□□ 0.29
COMMD4Q9H0A8 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
COMMD4Q9H0A8 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
COMMD4Q9H0A8 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
COMMD4Q9H0A8 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
COMMD4Q9H0A8 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
COMMD4Q9H0A8 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC16.89■□□□□ 0.29
COMMD4Q9H0A8 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
COMMD4Q9H0A8 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC16.88■□□□□ 0.29
COMMD4Q9H0A8 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
COMMD4Q9H0A8 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
COMMD4Q9H0A8 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms