Protein–RNA interactions for Protein: Q9BQW3

EBF4, Transcription factor COE4, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF4Q9BQW3 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC18.68■□□□□ 0.58
EBF4Q9BQW3 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
EBF4Q9BQW3 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
EBF4Q9BQW3 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
EBF4Q9BQW3 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
EBF4Q9BQW3 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
EBF4Q9BQW3 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC18.67■□□□□ 0.58
EBF4Q9BQW3 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC18.67■□□□□ 0.58
EBF4Q9BQW3 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
EBF4Q9BQW3 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC18.67■□□□□ 0.58
EBF4Q9BQW3 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC18.67■□□□□ 0.58
EBF4Q9BQW3 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC18.67■□□□□ 0.58
EBF4Q9BQW3 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC18.67■□□□□ 0.58
EBF4Q9BQW3 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
EBF4Q9BQW3 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
EBF4Q9BQW3 AC093787.1-201ENST00000450396 207 ntBASIC18.67■□□□□ 0.58
EBF4Q9BQW3 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC18.67■□□□□ 0.58
EBF4Q9BQW3 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC18.67■□□□□ 0.58
EBF4Q9BQW3 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
EBF4Q9BQW3 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
EBF4Q9BQW3 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
EBF4Q9BQW3 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
EBF4Q9BQW3 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC18.67■□□□□ 0.58
EBF4Q9BQW3 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC18.67■□□□□ 0.58
EBF4Q9BQW3 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
EBF4Q9BQW3 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
EBF4Q9BQW3 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
EBF4Q9BQW3 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC18.67■□□□□ 0.58
EBF4Q9BQW3 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC18.66■□□□□ 0.58
EBF4Q9BQW3 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC18.66■□□□□ 0.58
EBF4Q9BQW3 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
EBF4Q9BQW3 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
EBF4Q9BQW3 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC18.66■□□□□ 0.58
EBF4Q9BQW3 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
EBF4Q9BQW3 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
EBF4Q9BQW3 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
EBF4Q9BQW3 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC18.66■□□□□ 0.58
EBF4Q9BQW3 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
EBF4Q9BQW3 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC18.66■□□□□ 0.58
EBF4Q9BQW3 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC18.66■□□□□ 0.58
EBF4Q9BQW3 HES2-206ENST00000489730 730 ntTSL 2 BASIC18.66■□□□□ 0.58
EBF4Q9BQW3 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC18.66■□□□□ 0.58
EBF4Q9BQW3 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC18.66■□□□□ 0.58
EBF4Q9BQW3 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
EBF4Q9BQW3 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC18.66■□□□□ 0.58
EBF4Q9BQW3 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
EBF4Q9BQW3 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
EBF4Q9BQW3 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
EBF4Q9BQW3 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC18.66■□□□□ 0.58
EBF4Q9BQW3 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
EBF4Q9BQW3 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC18.66■□□□□ 0.58
EBF4Q9BQW3 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
EBF4Q9BQW3 FEM1AP3-201ENST00000403722 1741 ntBASIC18.66■□□□□ 0.58
EBF4Q9BQW3 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
EBF4Q9BQW3 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC18.66■□□□□ 0.58
EBF4Q9BQW3 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
EBF4Q9BQW3 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC18.65■□□□□ 0.58
EBF4Q9BQW3 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC18.65■□□□□ 0.58
EBF4Q9BQW3 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
EBF4Q9BQW3 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC18.65■□□□□ 0.58
EBF4Q9BQW3 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC18.65■□□□□ 0.58
EBF4Q9BQW3 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
EBF4Q9BQW3 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
EBF4Q9BQW3 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
EBF4Q9BQW3 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
EBF4Q9BQW3 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC18.65■□□□□ 0.58
EBF4Q9BQW3 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
EBF4Q9BQW3 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
EBF4Q9BQW3 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC18.65■□□□□ 0.58
EBF4Q9BQW3 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC18.65■□□□□ 0.58
EBF4Q9BQW3 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
EBF4Q9BQW3 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
EBF4Q9BQW3 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC18.65■□□□□ 0.58
EBF4Q9BQW3 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC18.65■□□□□ 0.58
EBF4Q9BQW3 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC18.65■□□□□ 0.58
EBF4Q9BQW3 AC034268.1-201ENST00000441047 882 ntBASIC18.65■□□□□ 0.58
EBF4Q9BQW3 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC18.65■□□□□ 0.58
EBF4Q9BQW3 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC18.65■□□□□ 0.58
EBF4Q9BQW3 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC18.65■□□□□ 0.58
EBF4Q9BQW3 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
EBF4Q9BQW3 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
EBF4Q9BQW3 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC18.65■□□□□ 0.58
EBF4Q9BQW3 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
EBF4Q9BQW3 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
EBF4Q9BQW3 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
EBF4Q9BQW3 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
EBF4Q9BQW3 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
EBF4Q9BQW3 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC18.65■□□□□ 0.58
EBF4Q9BQW3 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
EBF4Q9BQW3 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
EBF4Q9BQW3 ABALON-201ENST00000629058 1903 ntBASIC18.64■□□□□ 0.58
EBF4Q9BQW3 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.58
EBF4Q9BQW3 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
EBF4Q9BQW3 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
EBF4Q9BQW3 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
EBF4Q9BQW3 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
EBF4Q9BQW3 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC18.64■□□□□ 0.57
EBF4Q9BQW3 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC18.64■□□□□ 0.57
EBF4Q9BQW3 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
EBF4Q9BQW3 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms