Protein–RNA interactions for Protein: Q96KN7

RPGRIP1, X-linked retinitis pigmentosa GTPase regulator-interacting protein 1, humanhuman

Predictions only

Length 1,286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPGRIP1Q96KN7 NUDT16P1-203ENST00000513809 620 ntBASIC21.09■□□□□ 0.97
RPGRIP1Q96KN7 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC21.09■□□□□ 0.97
RPGRIP1Q96KN7 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC21.09■□□□□ 0.97
RPGRIP1Q96KN7 REXO1L10P-201ENST00000615707 1290 ntBASIC21.09■□□□□ 0.97
RPGRIP1Q96KN7 AL121829.2-201ENST00000620908 328 ntBASIC21.09■□□□□ 0.97
RPGRIP1Q96KN7 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
RPGRIP1Q96KN7 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
RPGRIP1Q96KN7 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
RPGRIP1Q96KN7 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RPGRIP1Q96KN7 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC21.09■□□□□ 0.97
RPGRIP1Q96KN7 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC21.09■□□□□ 0.97
RPGRIP1Q96KN7 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC21.08■□□□□ 0.97
RPGRIP1Q96KN7 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC21.08■□□□□ 0.97
RPGRIP1Q96KN7 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
RPGRIP1Q96KN7 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
RPGRIP1Q96KN7 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
RPGRIP1Q96KN7 TERF1P1-201ENST00000311003 1181 ntBASIC21.08■□□□□ 0.97
RPGRIP1Q96KN7 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
RPGRIP1Q96KN7 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
RPGRIP1Q96KN7 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
RPGRIP1Q96KN7 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC21.08■□□□□ 0.97
RPGRIP1Q96KN7 HES2-206ENST00000489730 730 ntTSL 2 BASIC21.08■□□□□ 0.97
RPGRIP1Q96KN7 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC21.08■□□□□ 0.97
RPGRIP1Q96KN7 NAPSB-206ENST00000562112 1266 ntBASIC21.08■□□□□ 0.97
RPGRIP1Q96KN7 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC21.08■□□□□ 0.97
RPGRIP1Q96KN7 AC087388.1-201ENST00000571370 1112 ntBASIC21.08■□□□□ 0.97
RPGRIP1Q96KN7 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
RPGRIP1Q96KN7 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC21.08■□□□□ 0.97
RPGRIP1Q96KN7 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.96
RPGRIP1Q96KN7 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC21.08■□□□□ 0.96
RPGRIP1Q96KN7 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.96
RPGRIP1Q96KN7 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
RPGRIP1Q96KN7 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
RPGRIP1Q96KN7 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
RPGRIP1Q96KN7 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC21.08■□□□□ 0.96
RPGRIP1Q96KN7 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
RPGRIP1Q96KN7 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC21.08■□□□□ 0.96
RPGRIP1Q96KN7 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
RPGRIP1Q96KN7 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RPGRIP1Q96KN7 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RPGRIP1Q96KN7 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC21.07■□□□□ 0.96
RPGRIP1Q96KN7 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
RPGRIP1Q96KN7 PWWP2AP1-201ENST00000429776 2273 ntBASIC21.07■□□□□ 0.96
RPGRIP1Q96KN7 EML3-217ENST00000531557 2509 ntTSL 5 BASIC21.07■□□□□ 0.96
RPGRIP1Q96KN7 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
RPGRIP1Q96KN7 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RPGRIP1Q96KN7 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RPGRIP1Q96KN7 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RPGRIP1Q96KN7 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC21.07■□□□□ 0.96
RPGRIP1Q96KN7 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC21.07■□□□□ 0.96
RPGRIP1Q96KN7 CFL2-205ENST00000555765 632 ntTSL 2 BASIC21.07■□□□□ 0.96
RPGRIP1Q96KN7 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC21.07■□□□□ 0.96
RPGRIP1Q96KN7 WDR88-203ENST00000592765 651 ntTSL 5 BASIC21.07■□□□□ 0.96
RPGRIP1Q96KN7 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RPGRIP1Q96KN7 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
RPGRIP1Q96KN7 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RPGRIP1Q96KN7 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RPGRIP1Q96KN7 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
RPGRIP1Q96KN7 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC21.07■□□□□ 0.96
RPGRIP1Q96KN7 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC21.07■□□□□ 0.96
RPGRIP1Q96KN7 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC21.06■□□□□ 0.96
RPGRIP1Q96KN7 KRT18P22-201ENST00000402024 1347 ntBASIC21.06■□□□□ 0.96
RPGRIP1Q96KN7 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
RPGRIP1Q96KN7 AL138781.2-201ENST00000617896 1843 ntBASIC21.06■□□□□ 0.96
RPGRIP1Q96KN7 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
RPGRIP1Q96KN7 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
RPGRIP1Q96KN7 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC21.06■□□□□ 0.96
RPGRIP1Q96KN7 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
RPGRIP1Q96KN7 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
RPGRIP1Q96KN7 AL390955.1-201ENST00000428694 934 ntBASIC21.06■□□□□ 0.96
RPGRIP1Q96KN7 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC21.06■□□□□ 0.96
RPGRIP1Q96KN7 F2R-202ENST00000505600 442 ntTSL 2 BASIC21.06■□□□□ 0.96
RPGRIP1Q96KN7 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC21.06■□□□□ 0.96
RPGRIP1Q96KN7 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC21.06■□□□□ 0.96
RPGRIP1Q96KN7 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC21.06■□□□□ 0.96
RPGRIP1Q96KN7 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
RPGRIP1Q96KN7 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
RPGRIP1Q96KN7 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
RPGRIP1Q96KN7 CYP2D8P-201ENST00000433633 1490 ntBASIC21.06■□□□□ 0.96
RPGRIP1Q96KN7 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC21.06■□□□□ 0.96
RPGRIP1Q96KN7 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
RPGRIP1Q96KN7 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC21.06■□□□□ 0.96
RPGRIP1Q96KN7 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC21.06■□□□□ 0.96
RPGRIP1Q96KN7 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
RPGRIP1Q96KN7 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC21.05■□□□□ 0.96
RPGRIP1Q96KN7 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC21.05■□□□□ 0.96
RPGRIP1Q96KN7 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
RPGRIP1Q96KN7 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
RPGRIP1Q96KN7 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
RPGRIP1Q96KN7 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC21.05■□□□□ 0.96
RPGRIP1Q96KN7 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
RPGRIP1Q96KN7 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
RPGRIP1Q96KN7 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC21.05■□□□□ 0.96
RPGRIP1Q96KN7 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC21.05■□□□□ 0.96
RPGRIP1Q96KN7 DUX4L26-201ENST00000489078 1255 ntBASIC21.05■□□□□ 0.96
RPGRIP1Q96KN7 AP002982.1-201ENST00000492365 877 ntBASIC21.05■□□□□ 0.96
RPGRIP1Q96KN7 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
RPGRIP1Q96KN7 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
RPGRIP1Q96KN7 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
RPGRIP1Q96KN7 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms