Protein–RNA interactions for Protein: Q96BQ3

TRIM43, Tripartite motif-containing protein 43, humanhuman

Predicted RBP Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43Q96BQ3 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
TRIM43Q96BQ3 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC20.81■□□□□ 0.92
TRIM43Q96BQ3 AL136038.4-201ENST00000603606 1261 ntBASIC20.81■□□□□ 0.92
TRIM43Q96BQ3 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TRIM43Q96BQ3 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TRIM43Q96BQ3 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TRIM43Q96BQ3 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TRIM43Q96BQ3 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TRIM43Q96BQ3 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
TRIM43Q96BQ3 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
TRIM43Q96BQ3 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC20.8■□□□□ 0.92
TRIM43Q96BQ3 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC20.8■□□□□ 0.92
TRIM43Q96BQ3 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC20.8■□□□□ 0.92
TRIM43Q96BQ3 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC20.8■□□□□ 0.92
TRIM43Q96BQ3 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC20.8■□□□□ 0.92
TRIM43Q96BQ3 BX640515.1-201ENST00000617215 977 ntBASIC20.8■□□□□ 0.92
TRIM43Q96BQ3 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TRIM43Q96BQ3 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC20.8■□□□□ 0.92
TRIM43Q96BQ3 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TRIM43Q96BQ3 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TRIM43Q96BQ3 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
TRIM43Q96BQ3 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
TRIM43Q96BQ3 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC20.79■□□□□ 0.92
TRIM43Q96BQ3 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC20.79■□□□□ 0.92
TRIM43Q96BQ3 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
TRIM43Q96BQ3 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
TRIM43Q96BQ3 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
TRIM43Q96BQ3 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC20.79■□□□□ 0.92
TRIM43Q96BQ3 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
TRIM43Q96BQ3 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
TRIM43Q96BQ3 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC20.79■□□□□ 0.92
TRIM43Q96BQ3 AL023284.2-201ENST00000405850 579 ntBASIC20.79■□□□□ 0.92
TRIM43Q96BQ3 TSPY12P-201ENST00000421279 868 ntBASIC20.79■□□□□ 0.92
TRIM43Q96BQ3 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC20.79■□□□□ 0.92
TRIM43Q96BQ3 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
TRIM43Q96BQ3 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC20.79■□□□□ 0.92
TRIM43Q96BQ3 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC20.79■□□□□ 0.92
TRIM43Q96BQ3 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
TRIM43Q96BQ3 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC20.79■□□□□ 0.92
TRIM43Q96BQ3 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC20.79■□□□□ 0.92
TRIM43Q96BQ3 NME4-212ENST00000621774 904 ntTSL 3 BASIC20.79■□□□□ 0.92
TRIM43Q96BQ3 VPS51-217ENST00000639871 243 ntTSL 5 BASIC20.79■□□□□ 0.92
TRIM43Q96BQ3 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC20.79■□□□□ 0.92
TRIM43Q96BQ3 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
TRIM43Q96BQ3 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
TRIM43Q96BQ3 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
TRIM43Q96BQ3 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC20.79■□□□□ 0.92
TRIM43Q96BQ3 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC20.79■□□□□ 0.92
TRIM43Q96BQ3 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC20.79■□□□□ 0.92
TRIM43Q96BQ3 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC20.79■□□□□ 0.92
TRIM43Q96BQ3 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TRIM43Q96BQ3 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC20.78■□□□□ 0.92
TRIM43Q96BQ3 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
TRIM43Q96BQ3 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TRIM43Q96BQ3 DFFB-203ENST00000341385 572 ntTSL 5 BASIC20.78■□□□□ 0.92
TRIM43Q96BQ3 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
TRIM43Q96BQ3 AL590627.1-203ENST00000421194 1026 ntBASIC20.78■□□□□ 0.92
TRIM43Q96BQ3 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC20.78■□□□□ 0.92
TRIM43Q96BQ3 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC20.78■□□□□ 0.92
TRIM43Q96BQ3 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC20.78■□□□□ 0.92
TRIM43Q96BQ3 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC20.78■□□□□ 0.92
TRIM43Q96BQ3 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC20.78■□□□□ 0.92
TRIM43Q96BQ3 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
TRIM43Q96BQ3 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
TRIM43Q96BQ3 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC20.78■□□□□ 0.92
TRIM43Q96BQ3 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
TRIM43Q96BQ3 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TRIM43Q96BQ3 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
TRIM43Q96BQ3 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
TRIM43Q96BQ3 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC20.77■□□□□ 0.92
TRIM43Q96BQ3 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC20.77■□□□□ 0.92
TRIM43Q96BQ3 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
TRIM43Q96BQ3 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC20.77■□□□□ 0.92
TRIM43Q96BQ3 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
TRIM43Q96BQ3 GRAMD4P1-201ENST00000435181 1110 ntBASIC20.77■□□□□ 0.92
TRIM43Q96BQ3 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC20.77■□□□□ 0.92
TRIM43Q96BQ3 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC20.77■□□□□ 0.92
TRIM43Q96BQ3 AC138894.3-201ENST00000603787 634 ntBASIC20.77■□□□□ 0.92
TRIM43Q96BQ3 AL353801.3-201ENST00000609898 542 ntBASIC20.77■□□□□ 0.92
TRIM43Q96BQ3 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
TRIM43Q96BQ3 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC20.77■□□□□ 0.91
TRIM43Q96BQ3 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
TRIM43Q96BQ3 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC20.76■□□□□ 0.91
TRIM43Q96BQ3 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
TRIM43Q96BQ3 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
TRIM43Q96BQ3 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
TRIM43Q96BQ3 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
TRIM43Q96BQ3 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC20.76■□□□□ 0.91
TRIM43Q96BQ3 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
TRIM43Q96BQ3 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
TRIM43Q96BQ3 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
TRIM43Q96BQ3 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
TRIM43Q96BQ3 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC20.76■□□□□ 0.91
TRIM43Q96BQ3 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
TRIM43Q96BQ3 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC20.76■□□□□ 0.91
TRIM43Q96BQ3 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC20.76■□□□□ 0.91
TRIM43Q96BQ3 AC104819.1-201ENST00000504587 486 ntBASIC20.76■□□□□ 0.91
TRIM43Q96BQ3 PENK-208ENST00000523051 772 ntTSL 5 BASIC20.76■□□□□ 0.91
TRIM43Q96BQ3 TPM1-218ENST00000559281 851 ntTSL 5 BASIC20.76■□□□□ 0.91
TRIM43Q96BQ3 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC20.76■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms