Protein–RNA interactions for Protein: Q8WV41

SNX33, Sorting nexin-33, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX33Q8WV41 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SNX33Q8WV41 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SNX33Q8WV41 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
SNX33Q8WV41 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
SNX33Q8WV41 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SNX33Q8WV41 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
SNX33Q8WV41 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SNX33Q8WV41 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
SNX33Q8WV41 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SNX33Q8WV41 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SNX33Q8WV41 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC17.26■□□□□ 0.35
SNX33Q8WV41 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SNX33Q8WV41 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SNX33Q8WV41 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC17.26■□□□□ 0.35
SNX33Q8WV41 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC17.26■□□□□ 0.35
SNX33Q8WV41 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SNX33Q8WV41 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC17.26■□□□□ 0.35
SNX33Q8WV41 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC17.26■□□□□ 0.35
SNX33Q8WV41 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SNX33Q8WV41 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SNX33Q8WV41 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
SNX33Q8WV41 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SNX33Q8WV41 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SNX33Q8WV41 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SNX33Q8WV41 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SNX33Q8WV41 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SNX33Q8WV41 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC17.25■□□□□ 0.35
SNX33Q8WV41 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
SNX33Q8WV41 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
SNX33Q8WV41 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC17.25■□□□□ 0.35
SNX33Q8WV41 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC17.25■□□□□ 0.35
SNX33Q8WV41 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
SNX33Q8WV41 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SNX33Q8WV41 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC17.25■□□□□ 0.35
SNX33Q8WV41 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC17.25■□□□□ 0.35
SNX33Q8WV41 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SNX33Q8WV41 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SNX33Q8WV41 AC116351.2-201ENST00000606540 1585 ntBASIC17.25■□□□□ 0.35
SNX33Q8WV41 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SNX33Q8WV41 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
SNX33Q8WV41 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SNX33Q8WV41 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SNX33Q8WV41 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SNX33Q8WV41 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC17.25■□□□□ 0.35
SNX33Q8WV41 GAS7-202ENST00000396115 929 ntTSL 5 BASIC17.25■□□□□ 0.35
SNX33Q8WV41 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SNX33Q8WV41 PNMA6B-201ENST00000538162 1200 ntBASIC17.25■□□□□ 0.35
SNX33Q8WV41 REXO2-208ENST00000539754 791 ntTSL 2 BASIC17.25■□□□□ 0.35
SNX33Q8WV41 HR-201ENST00000312841 5351 ntTSL 5 BASIC17.25■□□□□ 0.35
SNX33Q8WV41 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
SNX33Q8WV41 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
SNX33Q8WV41 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SNX33Q8WV41 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC17.25■□□□□ 0.35
SNX33Q8WV41 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SNX33Q8WV41 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC17.25■□□□□ 0.35
SNX33Q8WV41 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SNX33Q8WV41 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SNX33Q8WV41 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SNX33Q8WV41 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SNX33Q8WV41 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SNX33Q8WV41 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
SNX33Q8WV41 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
SNX33Q8WV41 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SNX33Q8WV41 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
SNX33Q8WV41 AC141586.3-201ENST00000562166 1838 ntBASIC17.24■□□□□ 0.35
SNX33Q8WV41 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
SNX33Q8WV41 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SNX33Q8WV41 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC17.24■□□□□ 0.35
SNX33Q8WV41 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SNX33Q8WV41 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SNX33Q8WV41 CROCCP3-202ENST00000420820 1947 ntBASIC17.24■□□□□ 0.35
SNX33Q8WV41 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SNX33Q8WV41 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
SNX33Q8WV41 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SNX33Q8WV41 CALM3-202ENST00000391918 702 ntTSL 2 BASIC17.24■□□□□ 0.35
SNX33Q8WV41 GGT1-206ENST00000404223 952 ntTSL 2 BASIC17.24■□□□□ 0.35
SNX33Q8WV41 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC17.24■□□□□ 0.35
SNX33Q8WV41 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC17.24■□□□□ 0.35
SNX33Q8WV41 OR2A1-AS1-207ENST00000486094 819 ntBASIC17.24■□□□□ 0.35
SNX33Q8WV41 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC17.24■□□□□ 0.35
SNX33Q8WV41 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC17.24■□□□□ 0.35
SNX33Q8WV41 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SNX33Q8WV41 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SNX33Q8WV41 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SNX33Q8WV41 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC17.24■□□□□ 0.35
SNX33Q8WV41 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SNX33Q8WV41 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SNX33Q8WV41 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
SNX33Q8WV41 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
SNX33Q8WV41 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
SNX33Q8WV41 PKD1P1-201ENST00000458669 6805 ntBASIC17.24■□□□□ 0.35
SNX33Q8WV41 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC17.24■□□□□ 0.35
SNX33Q8WV41 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SNX33Q8WV41 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
SNX33Q8WV41 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
SNX33Q8WV41 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC17.24■□□□□ 0.35
SNX33Q8WV41 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC17.24■□□□□ 0.35
SNX33Q8WV41 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC17.24■□□□□ 0.35
SNX33Q8WV41 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SNX33Q8WV41 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms