Protein–RNA interactions for Protein: Q8TD47

RPS4Y2, 40S ribosomal protein S4, Y isoform 2, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4Y2Q8TD47 NME6-213ENST00000451657 871 ntTSL 2 BASIC16.77■□□□□ 0.28
RPS4Y2Q8TD47 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC16.77■□□□□ 0.28
RPS4Y2Q8TD47 GXYLT1P5-201ENST00000614548 1189 ntBASIC16.77■□□□□ 0.28
RPS4Y2Q8TD47 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC16.77■□□□□ 0.28
RPS4Y2Q8TD47 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
RPS4Y2Q8TD47 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
RPS4Y2Q8TD47 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
RPS4Y2Q8TD47 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC16.77■□□□□ 0.28
RPS4Y2Q8TD47 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
RPS4Y2Q8TD47 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
RPS4Y2Q8TD47 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC16.77■□□□□ 0.27
RPS4Y2Q8TD47 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
RPS4Y2Q8TD47 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
RPS4Y2Q8TD47 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC16.77■□□□□ 0.27
RPS4Y2Q8TD47 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
RPS4Y2Q8TD47 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.27
RPS4Y2Q8TD47 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RPS4Y2Q8TD47 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
RPS4Y2Q8TD47 MKRN4P-201ENST00000444706 1521 ntBASIC16.76■□□□□ 0.27
RPS4Y2Q8TD47 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
RPS4Y2Q8TD47 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
RPS4Y2Q8TD47 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RPS4Y2Q8TD47 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
RPS4Y2Q8TD47 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
RPS4Y2Q8TD47 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
RPS4Y2Q8TD47 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RPS4Y2Q8TD47 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC16.76■□□□□ 0.27
RPS4Y2Q8TD47 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC16.76■□□□□ 0.27
RPS4Y2Q8TD47 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
RPS4Y2Q8TD47 AL121906.2-201ENST00000621597 723 ntBASIC16.76■□□□□ 0.27
RPS4Y2Q8TD47 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC16.76■□□□□ 0.27
RPS4Y2Q8TD47 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
RPS4Y2Q8TD47 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
RPS4Y2Q8TD47 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC16.76■□□□□ 0.27
RPS4Y2Q8TD47 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
RPS4Y2Q8TD47 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
RPS4Y2Q8TD47 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RPS4Y2Q8TD47 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
RPS4Y2Q8TD47 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RPS4Y2Q8TD47 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC16.75■□□□□ 0.27
RPS4Y2Q8TD47 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC16.75■□□□□ 0.27
RPS4Y2Q8TD47 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
RPS4Y2Q8TD47 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
RPS4Y2Q8TD47 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RPS4Y2Q8TD47 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC16.75■□□□□ 0.27
RPS4Y2Q8TD47 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
RPS4Y2Q8TD47 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC16.75■□□□□ 0.27
RPS4Y2Q8TD47 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RPS4Y2Q8TD47 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC16.75■□□□□ 0.27
RPS4Y2Q8TD47 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC16.75■□□□□ 0.27
RPS4Y2Q8TD47 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RPS4Y2Q8TD47 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC16.75■□□□□ 0.27
RPS4Y2Q8TD47 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RPS4Y2Q8TD47 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
RPS4Y2Q8TD47 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC16.75■□□□□ 0.27
RPS4Y2Q8TD47 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC16.75■□□□□ 0.27
RPS4Y2Q8TD47 AL121832.2-201ENST00000610979 668 ntBASIC16.75■□□□□ 0.27
RPS4Y2Q8TD47 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC16.75■□□□□ 0.27
RPS4Y2Q8TD47 AL050303.2-201ENST00000619798 666 ntBASIC16.75■□□□□ 0.27
RPS4Y2Q8TD47 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC16.75■□□□□ 0.27
RPS4Y2Q8TD47 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RPS4Y2Q8TD47 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RPS4Y2Q8TD47 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
RPS4Y2Q8TD47 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC16.75■□□□□ 0.27
RPS4Y2Q8TD47 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
RPS4Y2Q8TD47 AC073592.3-201ENST00000625118 1834 ntBASIC16.75■□□□□ 0.27
RPS4Y2Q8TD47 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RPS4Y2Q8TD47 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RPS4Y2Q8TD47 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC16.74■□□□□ 0.27
RPS4Y2Q8TD47 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RPS4Y2Q8TD47 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC16.74■□□□□ 0.27
RPS4Y2Q8TD47 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC16.74■□□□□ 0.27
RPS4Y2Q8TD47 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
RPS4Y2Q8TD47 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC16.74■□□□□ 0.27
RPS4Y2Q8TD47 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RPS4Y2Q8TD47 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
RPS4Y2Q8TD47 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
RPS4Y2Q8TD47 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC16.74■□□□□ 0.27
RPS4Y2Q8TD47 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
RPS4Y2Q8TD47 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RPS4Y2Q8TD47 BX276092.2-201ENST00000417668 665 ntBASIC16.74■□□□□ 0.27
RPS4Y2Q8TD47 SERPINH1P1-201ENST00000419794 1249 ntBASIC16.74■□□□□ 0.27
RPS4Y2Q8TD47 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC16.74■□□□□ 0.27
RPS4Y2Q8TD47 NCF1B-203ENST00000435988 1254 ntBASIC16.74■□□□□ 0.27
RPS4Y2Q8TD47 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC16.74■□□□□ 0.27
RPS4Y2Q8TD47 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC16.74■□□□□ 0.27
RPS4Y2Q8TD47 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC16.74■□□□□ 0.27
RPS4Y2Q8TD47 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC16.74■□□□□ 0.27
RPS4Y2Q8TD47 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC16.74■□□□□ 0.27
RPS4Y2Q8TD47 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
RPS4Y2Q8TD47 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC16.74■□□□□ 0.27
RPS4Y2Q8TD47 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
RPS4Y2Q8TD47 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC16.74■□□□□ 0.27
RPS4Y2Q8TD47 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC16.74■□□□□ 0.27
RPS4Y2Q8TD47 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RPS4Y2Q8TD47 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RPS4Y2Q8TD47 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
RPS4Y2Q8TD47 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RPS4Y2Q8TD47 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RPS4Y2Q8TD47 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms