Protein–RNA interactions for Protein: Q8TAB3

PCDH19, Protocadherin-19, humanhuman

Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH19Q8TAB3 FEM1AP3-201ENST00000403722 1741 ntBASIC19.79■□□□□ 0.76
PCDH19Q8TAB3 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC19.79■□□□□ 0.76
PCDH19Q8TAB3 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
PCDH19Q8TAB3 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC19.78■□□□□ 0.76
PCDH19Q8TAB3 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC19.78■□□□□ 0.76
PCDH19Q8TAB3 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PCDH19Q8TAB3 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
PCDH19Q8TAB3 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
PCDH19Q8TAB3 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
PCDH19Q8TAB3 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
PCDH19Q8TAB3 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PCDH19Q8TAB3 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC19.78■□□□□ 0.76
PCDH19Q8TAB3 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PCDH19Q8TAB3 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC19.78■□□□□ 0.76
PCDH19Q8TAB3 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PCDH19Q8TAB3 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC19.78■□□□□ 0.76
PCDH19Q8TAB3 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC19.78■□□□□ 0.76
PCDH19Q8TAB3 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
PCDH19Q8TAB3 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC19.78■□□□□ 0.76
PCDH19Q8TAB3 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC19.78■□□□□ 0.76
PCDH19Q8TAB3 AL353708.3-201ENST00000610272 989 ntBASIC19.78■□□□□ 0.76
PCDH19Q8TAB3 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PCDH19Q8TAB3 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC19.78■□□□□ 0.76
PCDH19Q8TAB3 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PCDH19Q8TAB3 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC19.78■□□□□ 0.76
PCDH19Q8TAB3 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PCDH19Q8TAB3 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
PCDH19Q8TAB3 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC19.78■□□□□ 0.76
PCDH19Q8TAB3 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC19.77■□□□□ 0.76
PCDH19Q8TAB3 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
PCDH19Q8TAB3 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC19.77■□□□□ 0.76
PCDH19Q8TAB3 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
PCDH19Q8TAB3 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
PCDH19Q8TAB3 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
PCDH19Q8TAB3 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
PCDH19Q8TAB3 FDX2-207ENST00000494368 584 ntTSL 4 BASIC19.77■□□□□ 0.76
PCDH19Q8TAB3 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC19.77■□□□□ 0.76
PCDH19Q8TAB3 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC19.77■□□□□ 0.76
PCDH19Q8TAB3 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC19.77■□□□□ 0.76
PCDH19Q8TAB3 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC19.77■□□□□ 0.76
PCDH19Q8TAB3 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC19.77■□□□□ 0.76
PCDH19Q8TAB3 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
PCDH19Q8TAB3 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
PCDH19Q8TAB3 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC19.77■□□□□ 0.76
PCDH19Q8TAB3 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
PCDH19Q8TAB3 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC19.77■□□□□ 0.76
PCDH19Q8TAB3 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
PCDH19Q8TAB3 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.75
PCDH19Q8TAB3 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PCDH19Q8TAB3 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PCDH19Q8TAB3 GOLGA6L5P-202ENST00000515341 1828 ntBASIC19.76■□□□□ 0.75
PCDH19Q8TAB3 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PCDH19Q8TAB3 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PCDH19Q8TAB3 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
PCDH19Q8TAB3 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC19.76■□□□□ 0.75
PCDH19Q8TAB3 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PCDH19Q8TAB3 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC19.76■□□□□ 0.75
PCDH19Q8TAB3 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PCDH19Q8TAB3 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PCDH19Q8TAB3 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
PCDH19Q8TAB3 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC19.76■□□□□ 0.75
PCDH19Q8TAB3 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PCDH19Q8TAB3 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PCDH19Q8TAB3 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC19.76■□□□□ 0.75
PCDH19Q8TAB3 AC004980.1-204ENST00000429707 299 ntBASIC19.76■□□□□ 0.75
PCDH19Q8TAB3 TSPY23P-201ENST00000440136 739 ntBASIC19.76■□□□□ 0.75
PCDH19Q8TAB3 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC19.76■□□□□ 0.75
PCDH19Q8TAB3 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC19.76■□□□□ 0.75
PCDH19Q8TAB3 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
PCDH19Q8TAB3 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC19.76■□□□□ 0.75
PCDH19Q8TAB3 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
PCDH19Q8TAB3 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
PCDH19Q8TAB3 CROCCP3-202ENST00000420820 1947 ntBASIC19.76■□□□□ 0.75
PCDH19Q8TAB3 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
PCDH19Q8TAB3 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PCDH19Q8TAB3 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC19.76■□□□□ 0.75
PCDH19Q8TAB3 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC19.76■□□□□ 0.75
PCDH19Q8TAB3 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
PCDH19Q8TAB3 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
PCDH19Q8TAB3 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
PCDH19Q8TAB3 GAS2L1P1-201ENST00000420145 1480 ntBASIC19.75■□□□□ 0.75
PCDH19Q8TAB3 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
PCDH19Q8TAB3 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PCDH19Q8TAB3 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PCDH19Q8TAB3 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PCDH19Q8TAB3 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
PCDH19Q8TAB3 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PCDH19Q8TAB3 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PCDH19Q8TAB3 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PCDH19Q8TAB3 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
PCDH19Q8TAB3 TSPY21P-201ENST00000433481 731 ntBASIC19.75■□□□□ 0.75
PCDH19Q8TAB3 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC19.75■□□□□ 0.75
PCDH19Q8TAB3 AP002982.1-201ENST00000492365 877 ntBASIC19.75■□□□□ 0.75
PCDH19Q8TAB3 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC19.75■□□□□ 0.75
PCDH19Q8TAB3 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
PCDH19Q8TAB3 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC19.75■□□□□ 0.75
PCDH19Q8TAB3 ARL16-209ENST00000573715 763 ntTSL 3 BASIC19.75■□□□□ 0.75
PCDH19Q8TAB3 ARL16-211ENST00000576135 694 ntTSL 3 BASIC19.75■□□□□ 0.75
PCDH19Q8TAB3 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC19.75■□□□□ 0.75
PCDH19Q8TAB3 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC19.75■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 76.1 ms