Protein–RNA interactions for Protein: Q8NI28

LINC01006, Putative uncharacterized protein encoded by LINC01006, humanhuman

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01006Q8NI28 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
LINC01006Q8NI28 AC099778.1-201ENST00000568593 1911 ntBASIC14.9□□□□□ -0.02
LINC01006Q8NI28 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
LINC01006Q8NI28 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC14.9□□□□□ -0.02
LINC01006Q8NI28 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
LINC01006Q8NI28 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC14.9□□□□□ -0.02
LINC01006Q8NI28 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
LINC01006Q8NI28 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
LINC01006Q8NI28 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
LINC01006Q8NI28 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC14.9□□□□□ -0.02
LINC01006Q8NI28 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
LINC01006Q8NI28 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
LINC01006Q8NI28 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
LINC01006Q8NI28 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
LINC01006Q8NI28 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
LINC01006Q8NI28 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC14.9□□□□□ -0.02
LINC01006Q8NI28 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC14.9□□□□□ -0.02
LINC01006Q8NI28 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC14.9□□□□□ -0.02
LINC01006Q8NI28 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC14.9□□□□□ -0.02
LINC01006Q8NI28 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
LINC01006Q8NI28 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
LINC01006Q8NI28 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC14.9□□□□□ -0.02
LINC01006Q8NI28 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
LINC01006Q8NI28 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC14.9□□□□□ -0.02
LINC01006Q8NI28 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
LINC01006Q8NI28 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
LINC01006Q8NI28 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
LINC01006Q8NI28 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
LINC01006Q8NI28 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
LINC01006Q8NI28 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC14.89□□□□□ -0.03
LINC01006Q8NI28 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
LINC01006Q8NI28 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC14.89□□□□□ -0.03
LINC01006Q8NI28 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC14.89□□□□□ -0.03
LINC01006Q8NI28 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC14.89□□□□□ -0.03
LINC01006Q8NI28 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
LINC01006Q8NI28 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC14.89□□□□□ -0.03
LINC01006Q8NI28 HBZP1-201ENST00000354915 429 ntBASIC14.89□□□□□ -0.03
LINC01006Q8NI28 TPM4P1-201ENST00000436100 807 ntBASIC14.89□□□□□ -0.03
LINC01006Q8NI28 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC14.89□□□□□ -0.03
LINC01006Q8NI28 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC14.89□□□□□ -0.03
LINC01006Q8NI28 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
LINC01006Q8NI28 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC14.89□□□□□ -0.03
LINC01006Q8NI28 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC14.89□□□□□ -0.03
LINC01006Q8NI28 AC034232.1-201ENST00000506026 1064 ntBASIC14.89□□□□□ -0.03
LINC01006Q8NI28 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
LINC01006Q8NI28 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
LINC01006Q8NI28 AC092667.1-201ENST00000434301 2586 ntBASIC14.89□□□□□ -0.03
LINC01006Q8NI28 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC14.89□□□□□ -0.03
LINC01006Q8NI28 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
LINC01006Q8NI28 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
LINC01006Q8NI28 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
LINC01006Q8NI28 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
LINC01006Q8NI28 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
LINC01006Q8NI28 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
LINC01006Q8NI28 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
LINC01006Q8NI28 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
LINC01006Q8NI28 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
LINC01006Q8NI28 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
LINC01006Q8NI28 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
LINC01006Q8NI28 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
LINC01006Q8NI28 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
LINC01006Q8NI28 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
LINC01006Q8NI28 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
LINC01006Q8NI28 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
LINC01006Q8NI28 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC14.88□□□□□ -0.03
LINC01006Q8NI28 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
LINC01006Q8NI28 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
LINC01006Q8NI28 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC14.88□□□□□ -0.03
LINC01006Q8NI28 ATP5G2P1-201ENST00000433580 426 ntBASIC14.88□□□□□ -0.03
LINC01006Q8NI28 SPDYE13P-201ENST00000445314 798 ntBASIC14.88□□□□□ -0.03
LINC01006Q8NI28 RASA4DP-201ENST00000460726 1199 ntBASIC14.88□□□□□ -0.03
LINC01006Q8NI28 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
LINC01006Q8NI28 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC14.88□□□□□ -0.03
LINC01006Q8NI28 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
LINC01006Q8NI28 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC14.88□□□□□ -0.03
LINC01006Q8NI28 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC14.88□□□□□ -0.03
LINC01006Q8NI28 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
LINC01006Q8NI28 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
LINC01006Q8NI28 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
LINC01006Q8NI28 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
LINC01006Q8NI28 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
LINC01006Q8NI28 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
LINC01006Q8NI28 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
LINC01006Q8NI28 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
LINC01006Q8NI28 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC14.88□□□□□ -0.03
LINC01006Q8NI28 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
LINC01006Q8NI28 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
LINC01006Q8NI28 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
LINC01006Q8NI28 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
LINC01006Q8NI28 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
LINC01006Q8NI28 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
LINC01006Q8NI28 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
LINC01006Q8NI28 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
LINC01006Q8NI28 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
LINC01006Q8NI28 SDHAP1-207ENST00000440850 2000 ntBASIC14.87□□□□□ -0.03
LINC01006Q8NI28 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
LINC01006Q8NI28 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
LINC01006Q8NI28 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC14.87□□□□□ -0.03
LINC01006Q8NI28 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
LINC01006Q8NI28 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms