Protein–RNA interactions for Protein: Q8NF99

ZNF397, Zinc finger protein 397, humanhuman

Predicted RBP Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF397Q8NF99 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
ZNF397Q8NF99 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
ZNF397Q8NF99 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC21.15■□□□□ 0.98
ZNF397Q8NF99 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC21.15■□□□□ 0.98
ZNF397Q8NF99 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
ZNF397Q8NF99 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
ZNF397Q8NF99 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC21.15■□□□□ 0.98
ZNF397Q8NF99 SERPINH1P1-201ENST00000419794 1249 ntBASIC21.15■□□□□ 0.98
ZNF397Q8NF99 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
ZNF397Q8NF99 DUSP5P2-201ENST00000426873 1033 ntBASIC21.15■□□□□ 0.98
ZNF397Q8NF99 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC21.15■□□□□ 0.98
ZNF397Q8NF99 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC21.15■□□□□ 0.98
ZNF397Q8NF99 SERP1-205ENST00000487153 657 ntTSL 4 BASIC21.15■□□□□ 0.98
ZNF397Q8NF99 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC21.15■□□□□ 0.98
ZNF397Q8NF99 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC21.15■□□□□ 0.98
ZNF397Q8NF99 MYC-209ENST00000641252 345 ntBASIC21.15■□□□□ 0.98
ZNF397Q8NF99 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
ZNF397Q8NF99 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
ZNF397Q8NF99 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
ZNF397Q8NF99 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC21.15■□□□□ 0.98
ZNF397Q8NF99 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
ZNF397Q8NF99 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC21.15■□□□□ 0.98
ZNF397Q8NF99 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC21.15■□□□□ 0.98
ZNF397Q8NF99 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
ZNF397Q8NF99 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
ZNF397Q8NF99 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC21.14■□□□□ 0.98
ZNF397Q8NF99 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
ZNF397Q8NF99 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC21.14■□□□□ 0.98
ZNF397Q8NF99 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC21.14■□□□□ 0.98
ZNF397Q8NF99 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
ZNF397Q8NF99 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
ZNF397Q8NF99 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC21.14■□□□□ 0.98
ZNF397Q8NF99 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC21.14■□□□□ 0.98
ZNF397Q8NF99 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
ZNF397Q8NF99 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.98
ZNF397Q8NF99 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.98
ZNF397Q8NF99 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC21.14■□□□□ 0.97
ZNF397Q8NF99 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
ZNF397Q8NF99 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC21.14■□□□□ 0.97
ZNF397Q8NF99 OR2A1-AS1-201ENST00000462305 773 ntBASIC21.14■□□□□ 0.97
ZNF397Q8NF99 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC21.14■□□□□ 0.97
ZNF397Q8NF99 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
ZNF397Q8NF99 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
ZNF397Q8NF99 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC21.14■□□□□ 0.97
ZNF397Q8NF99 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
ZNF397Q8NF99 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
ZNF397Q8NF99 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC21.13■□□□□ 0.97
ZNF397Q8NF99 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
ZNF397Q8NF99 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC21.13■□□□□ 0.97
ZNF397Q8NF99 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
ZNF397Q8NF99 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
ZNF397Q8NF99 AL390719.1-204ENST00000412397 1219 ntBASIC21.13■□□□□ 0.97
ZNF397Q8NF99 NME6-213ENST00000451657 871 ntTSL 2 BASIC21.13■□□□□ 0.97
ZNF397Q8NF99 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC21.13■□□□□ 0.97
ZNF397Q8NF99 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC21.13■□□□□ 0.97
ZNF397Q8NF99 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC21.13■□□□□ 0.97
ZNF397Q8NF99 TFP1-202ENST00000475455 1573 ntBASIC21.13■□□□□ 0.97
ZNF397Q8NF99 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC21.13■□□□□ 0.97
ZNF397Q8NF99 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC21.13■□□□□ 0.97
ZNF397Q8NF99 AC090340.1-201ENST00000620778 4980 ntBASIC21.13■□□□□ 0.97
ZNF397Q8NF99 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
ZNF397Q8NF99 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC21.13■□□□□ 0.97
ZNF397Q8NF99 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC21.13■□□□□ 0.97
ZNF397Q8NF99 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
ZNF397Q8NF99 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC21.13■□□□□ 0.97
ZNF397Q8NF99 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
ZNF397Q8NF99 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
ZNF397Q8NF99 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
ZNF397Q8NF99 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC21.12■□□□□ 0.97
ZNF397Q8NF99 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
ZNF397Q8NF99 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC21.12■□□□□ 0.97
ZNF397Q8NF99 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
ZNF397Q8NF99 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
ZNF397Q8NF99 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC21.12■□□□□ 0.97
ZNF397Q8NF99 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
ZNF397Q8NF99 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
ZNF397Q8NF99 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
ZNF397Q8NF99 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC21.12■□□□□ 0.97
ZNF397Q8NF99 AC069152.1-201ENST00000438030 544 ntBASIC21.12■□□□□ 0.97
ZNF397Q8NF99 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC21.12■□□□□ 0.97
ZNF397Q8NF99 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC21.12■□□□□ 0.97
ZNF397Q8NF99 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
ZNF397Q8NF99 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
ZNF397Q8NF99 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC21.12■□□□□ 0.97
ZNF397Q8NF99 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
ZNF397Q8NF99 AC133041.1-202ENST00000642053 222 ntBASIC21.12■□□□□ 0.97
ZNF397Q8NF99 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC21.12■□□□□ 0.97
ZNF397Q8NF99 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
ZNF397Q8NF99 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC21.12■□□□□ 0.97
ZNF397Q8NF99 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
ZNF397Q8NF99 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC21.12■□□□□ 0.97
ZNF397Q8NF99 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
ZNF397Q8NF99 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
ZNF397Q8NF99 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC21.12■□□□□ 0.97
ZNF397Q8NF99 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
ZNF397Q8NF99 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
ZNF397Q8NF99 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
ZNF397Q8NF99 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
ZNF397Q8NF99 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
ZNF397Q8NF99 NOC2LP2-201ENST00000407594 1944 ntBASIC21.12■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms