Protein–RNA interactions for Protein: Q8NE63

HIPK4, Homeodomain-interacting protein kinase 4, humanhuman

Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK4Q8NE63 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC18.58■□□□□ 0.57
HIPK4Q8NE63 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
HIPK4Q8NE63 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
HIPK4Q8NE63 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC18.58■□□□□ 0.57
HIPK4Q8NE63 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
HIPK4Q8NE63 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.57
HIPK4Q8NE63 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC18.58■□□□□ 0.57
HIPK4Q8NE63 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
HIPK4Q8NE63 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
HIPK4Q8NE63 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC18.58■□□□□ 0.56
HIPK4Q8NE63 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
HIPK4Q8NE63 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
HIPK4Q8NE63 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC18.58■□□□□ 0.56
HIPK4Q8NE63 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
HIPK4Q8NE63 AC137761.2-201ENST00000561729 223 ntBASIC18.58■□□□□ 0.56
HIPK4Q8NE63 AC145350.3-201ENST00000569033 163 ntBASIC18.58■□□□□ 0.56
HIPK4Q8NE63 AL031963.3-201ENST00000606441 850 ntBASIC18.58■□□□□ 0.56
HIPK4Q8NE63 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC18.58■□□□□ 0.56
HIPK4Q8NE63 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC18.58■□□□□ 0.56
HIPK4Q8NE63 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC18.58■□□□□ 0.56
HIPK4Q8NE63 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
HIPK4Q8NE63 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC18.58■□□□□ 0.56
HIPK4Q8NE63 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
HIPK4Q8NE63 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.56
HIPK4Q8NE63 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
HIPK4Q8NE63 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
HIPK4Q8NE63 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
HIPK4Q8NE63 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
HIPK4Q8NE63 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
HIPK4Q8NE63 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
HIPK4Q8NE63 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
HIPK4Q8NE63 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
HIPK4Q8NE63 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
HIPK4Q8NE63 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
HIPK4Q8NE63 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
HIPK4Q8NE63 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC18.57■□□□□ 0.56
HIPK4Q8NE63 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
HIPK4Q8NE63 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
HIPK4Q8NE63 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
HIPK4Q8NE63 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
HIPK4Q8NE63 NOC2LP1-202ENST00000452600 2235 ntBASIC18.57■□□□□ 0.56
HIPK4Q8NE63 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
HIPK4Q8NE63 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
HIPK4Q8NE63 KRT8P20-201ENST00000423953 1409 ntBASIC18.57■□□□□ 0.56
HIPK4Q8NE63 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
HIPK4Q8NE63 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
HIPK4Q8NE63 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
HIPK4Q8NE63 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
HIPK4Q8NE63 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
HIPK4Q8NE63 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
HIPK4Q8NE63 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
HIPK4Q8NE63 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC18.56■□□□□ 0.56
HIPK4Q8NE63 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
HIPK4Q8NE63 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC18.56■□□□□ 0.56
HIPK4Q8NE63 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC18.56■□□□□ 0.56
HIPK4Q8NE63 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
HIPK4Q8NE63 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
HIPK4Q8NE63 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
HIPK4Q8NE63 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
HIPK4Q8NE63 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
HIPK4Q8NE63 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
HIPK4Q8NE63 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
HIPK4Q8NE63 HSCB-202ENST00000398941 955 ntTSL 2 BASIC18.56■□□□□ 0.56
HIPK4Q8NE63 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC18.56■□□□□ 0.56
HIPK4Q8NE63 PLD4-205ENST00000553861 667 ntTSL 2 BASIC18.56■□□□□ 0.56
HIPK4Q8NE63 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC18.56■□□□□ 0.56
HIPK4Q8NE63 MFSD11-216ENST00000590393 1141 ntBASIC18.56■□□□□ 0.56
HIPK4Q8NE63 MIR6821-201ENST00000617625 74 ntBASIC18.56■□□□□ 0.56
HIPK4Q8NE63 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
HIPK4Q8NE63 AC105020.6-201ENST00000621523 1217 ntBASIC18.56■□□□□ 0.56
HIPK4Q8NE63 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
HIPK4Q8NE63 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
HIPK4Q8NE63 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
HIPK4Q8NE63 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC18.56■□□□□ 0.56
HIPK4Q8NE63 TEX21P-204ENST00000641479 1693 ntBASIC18.56■□□□□ 0.56
HIPK4Q8NE63 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
HIPK4Q8NE63 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC18.56■□□□□ 0.56
HIPK4Q8NE63 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
HIPK4Q8NE63 BICD1-207ENST00000551848 1962 ntBASIC18.55■□□□□ 0.56
HIPK4Q8NE63 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
HIPK4Q8NE63 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
HIPK4Q8NE63 NOC2LP2-201ENST00000407594 1944 ntBASIC18.55■□□□□ 0.56
HIPK4Q8NE63 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC18.55■□□□□ 0.56
HIPK4Q8NE63 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
HIPK4Q8NE63 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC18.55■□□□□ 0.56
HIPK4Q8NE63 AL354751.1-201ENST00000412768 1863 ntBASIC18.55■□□□□ 0.56
HIPK4Q8NE63 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
HIPK4Q8NE63 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
HIPK4Q8NE63 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
HIPK4Q8NE63 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
HIPK4Q8NE63 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC18.55■□□□□ 0.56
HIPK4Q8NE63 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
HIPK4Q8NE63 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC18.55■□□□□ 0.56
HIPK4Q8NE63 WWOX-218ENST00000627394 894 ntTSL 5 BASIC18.55■□□□□ 0.56
HIPK4Q8NE63 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
HIPK4Q8NE63 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
HIPK4Q8NE63 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
HIPK4Q8NE63 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC18.55■□□□□ 0.56
HIPK4Q8NE63 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC18.55■□□□□ 0.56
HIPK4Q8NE63 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC18.55■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms