Protein–RNA interactions for Protein: Q8N228

SCML4, Sex comb on midleg-like protein 4, humanhuman

Predictions only

Length 414 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCML4Q8N228 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
SCML4Q8N228 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
SCML4Q8N228 AC092338.2-201ENST00000568827 1415 ntBASIC19.93■□□□□ 0.78
SCML4Q8N228 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC19.93■□□□□ 0.78
SCML4Q8N228 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SCML4Q8N228 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
SCML4Q8N228 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SCML4Q8N228 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SCML4Q8N228 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SCML4Q8N228 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
SCML4Q8N228 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SCML4Q8N228 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC19.93■□□□□ 0.78
SCML4Q8N228 IRX1P1-201ENST00000438849 1838 ntBASIC19.93■□□□□ 0.78
SCML4Q8N228 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
SCML4Q8N228 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC19.93■□□□□ 0.78
SCML4Q8N228 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC19.93■□□□□ 0.78
SCML4Q8N228 CCR12P-201ENST00000446203 998 ntBASIC19.93■□□□□ 0.78
SCML4Q8N228 TSPY17P-201ENST00000450329 467 ntBASIC19.93■□□□□ 0.78
SCML4Q8N228 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC19.93■□□□□ 0.78
SCML4Q8N228 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC19.93■□□□□ 0.78
SCML4Q8N228 AC010653.2-201ENST00000623505 997 ntBASIC19.93■□□□□ 0.78
SCML4Q8N228 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC19.93■□□□□ 0.78
SCML4Q8N228 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
SCML4Q8N228 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC19.93■□□□□ 0.78
SCML4Q8N228 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
SCML4Q8N228 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC19.93■□□□□ 0.78
SCML4Q8N228 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC19.93■□□□□ 0.78
SCML4Q8N228 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
SCML4Q8N228 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
SCML4Q8N228 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SCML4Q8N228 KRT8P3-201ENST00000519669 1449 ntBASIC19.93■□□□□ 0.78
SCML4Q8N228 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SCML4Q8N228 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
SCML4Q8N228 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
SCML4Q8N228 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SCML4Q8N228 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
SCML4Q8N228 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC19.92■□□□□ 0.78
SCML4Q8N228 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
SCML4Q8N228 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
SCML4Q8N228 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SCML4Q8N228 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC19.92■□□□□ 0.78
SCML4Q8N228 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC19.92■□□□□ 0.78
SCML4Q8N228 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
SCML4Q8N228 AL353719.1-201ENST00000566847 864 ntBASIC19.92■□□□□ 0.78
SCML4Q8N228 AC116562.4-202ENST00000641738 218 ntBASIC19.92■□□□□ 0.78
SCML4Q8N228 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
SCML4Q8N228 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC19.92■□□□□ 0.78
SCML4Q8N228 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC19.92■□□□□ 0.78
SCML4Q8N228 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC19.92■□□□□ 0.78
SCML4Q8N228 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC19.92■□□□□ 0.78
SCML4Q8N228 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC19.91■□□□□ 0.78
SCML4Q8N228 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
SCML4Q8N228 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SCML4Q8N228 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC19.91■□□□□ 0.78
SCML4Q8N228 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
SCML4Q8N228 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SCML4Q8N228 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
SCML4Q8N228 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SCML4Q8N228 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC19.91■□□□□ 0.78
SCML4Q8N228 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SCML4Q8N228 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
SCML4Q8N228 AC211429.1-201ENST00000415277 523 ntBASIC19.91■□□□□ 0.78
SCML4Q8N228 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
SCML4Q8N228 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
SCML4Q8N228 AC128688.1-201ENST00000487626 519 ntBASIC19.91■□□□□ 0.78
SCML4Q8N228 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC19.91■□□□□ 0.78
SCML4Q8N228 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC19.91■□□□□ 0.78
SCML4Q8N228 ARL16-209ENST00000573715 763 ntTSL 3 BASIC19.91■□□□□ 0.78
SCML4Q8N228 ARL16-211ENST00000576135 694 ntTSL 3 BASIC19.91■□□□□ 0.78
SCML4Q8N228 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC19.91■□□□□ 0.78
SCML4Q8N228 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
SCML4Q8N228 LINC01023-201ENST00000606054 436 ntBASIC19.91■□□□□ 0.78
SCML4Q8N228 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC19.91■□□□□ 0.78
SCML4Q8N228 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
SCML4Q8N228 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
SCML4Q8N228 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC19.91■□□□□ 0.78
SCML4Q8N228 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC19.91■□□□□ 0.78
SCML4Q8N228 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC19.91■□□□□ 0.78
SCML4Q8N228 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
SCML4Q8N228 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SCML4Q8N228 AC007952.6-201ENST00000573168 2673 ntBASIC19.9■□□□□ 0.78
SCML4Q8N228 AC003957.1-201ENST00000625108 2673 ntBASIC19.9■□□□□ 0.78
SCML4Q8N228 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SCML4Q8N228 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SCML4Q8N228 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SCML4Q8N228 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SCML4Q8N228 HIST1H2APS4-201ENST00000362070 348 ntBASIC19.9■□□□□ 0.78
SCML4Q8N228 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
SCML4Q8N228 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SCML4Q8N228 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SCML4Q8N228 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC19.9■□□□□ 0.78
SCML4Q8N228 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC19.9■□□□□ 0.78
SCML4Q8N228 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC19.9■□□□□ 0.78
SCML4Q8N228 AC133561.5-201ENST00000635547 218 ntBASIC19.9■□□□□ 0.78
SCML4Q8N228 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SCML4Q8N228 KRT18P22-201ENST00000402024 1347 ntBASIC19.9■□□□□ 0.78
SCML4Q8N228 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
SCML4Q8N228 LINC01568-207ENST00000641790 1380 ntBASIC19.9■□□□□ 0.78
SCML4Q8N228 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
SCML4Q8N228 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms