Protein–RNA interactions for Protein: Q8N1V8

LINC01561, Uncharacterized protein encoded by LINC01561, humanhuman

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01561Q8N1V8 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC12.86□□□□□ -0.35
LINC01561Q8N1V8 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
LINC01561Q8N1V8 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
LINC01561Q8N1V8 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
LINC01561Q8N1V8 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
LINC01561Q8N1V8 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC12.85□□□□□ -0.35
LINC01561Q8N1V8 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
LINC01561Q8N1V8 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC12.85□□□□□ -0.35
LINC01561Q8N1V8 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
LINC01561Q8N1V8 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
LINC01561Q8N1V8 AC138932.1-201ENST00000534164 6830 ntBASIC12.85□□□□□ -0.35
LINC01561Q8N1V8 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
LINC01561Q8N1V8 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC12.85□□□□□ -0.35
LINC01561Q8N1V8 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
LINC01561Q8N1V8 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC12.85□□□□□ -0.35
LINC01561Q8N1V8 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
LINC01561Q8N1V8 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
LINC01561Q8N1V8 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
LINC01561Q8N1V8 TUBB8P6-201ENST00000436895 1288 ntBASIC12.85□□□□□ -0.35
LINC01561Q8N1V8 RPS2P52-201ENST00000469610 820 ntBASIC12.85□□□□□ -0.35
LINC01561Q8N1V8 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC12.85□□□□□ -0.35
LINC01561Q8N1V8 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
LINC01561Q8N1V8 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC12.85□□□□□ -0.35
LINC01561Q8N1V8 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
LINC01561Q8N1V8 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
LINC01561Q8N1V8 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
LINC01561Q8N1V8 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC12.85□□□□□ -0.35
LINC01561Q8N1V8 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
LINC01561Q8N1V8 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
LINC01561Q8N1V8 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC12.85□□□□□ -0.35
LINC01561Q8N1V8 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
LINC01561Q8N1V8 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC12.85□□□□□ -0.35
LINC01561Q8N1V8 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
LINC01561Q8N1V8 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
LINC01561Q8N1V8 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
LINC01561Q8N1V8 BICD1-207ENST00000551848 1962 ntBASIC12.85□□□□□ -0.35
LINC01561Q8N1V8 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
LINC01561Q8N1V8 AL390961.4-201ENST00000623958 2535 ntBASIC12.85□□□□□ -0.35
LINC01561Q8N1V8 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
LINC01561Q8N1V8 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
LINC01561Q8N1V8 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC12.84□□□□□ -0.35
LINC01561Q8N1V8 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
LINC01561Q8N1V8 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
LINC01561Q8N1V8 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC12.84□□□□□ -0.35
LINC01561Q8N1V8 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
LINC01561Q8N1V8 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC12.84□□□□□ -0.35
LINC01561Q8N1V8 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
LINC01561Q8N1V8 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
LINC01561Q8N1V8 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC12.84□□□□□ -0.35
LINC01561Q8N1V8 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
LINC01561Q8N1V8 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
LINC01561Q8N1V8 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
LINC01561Q8N1V8 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
LINC01561Q8N1V8 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
LINC01561Q8N1V8 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
LINC01561Q8N1V8 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
LINC01561Q8N1V8 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
LINC01561Q8N1V8 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC12.84□□□□□ -0.35
LINC01561Q8N1V8 TREX2-204ENST00000370212 861 ntTSL 5 BASIC12.84□□□□□ -0.35
LINC01561Q8N1V8 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
LINC01561Q8N1V8 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
LINC01561Q8N1V8 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
LINC01561Q8N1V8 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC12.84□□□□□ -0.35
LINC01561Q8N1V8 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
LINC01561Q8N1V8 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC12.84□□□□□ -0.35
LINC01561Q8N1V8 AF201337.1-201ENST00000520239 748 ntBASIC12.84□□□□□ -0.35
LINC01561Q8N1V8 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC12.84□□□□□ -0.35
LINC01561Q8N1V8 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC12.84□□□□□ -0.35
LINC01561Q8N1V8 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC12.84□□□□□ -0.35
LINC01561Q8N1V8 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
LINC01561Q8N1V8 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
LINC01561Q8N1V8 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
LINC01561Q8N1V8 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
LINC01561Q8N1V8 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC12.84□□□□□ -0.35
LINC01561Q8N1V8 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
LINC01561Q8N1V8 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
LINC01561Q8N1V8 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
LINC01561Q8N1V8 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
LINC01561Q8N1V8 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
LINC01561Q8N1V8 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.35
LINC01561Q8N1V8 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.35
LINC01561Q8N1V8 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.35
LINC01561Q8N1V8 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
LINC01561Q8N1V8 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC12.83□□□□□ -0.35
LINC01561Q8N1V8 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC12.83□□□□□ -0.36
LINC01561Q8N1V8 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
LINC01561Q8N1V8 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC12.83□□□□□ -0.36
LINC01561Q8N1V8 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
LINC01561Q8N1V8 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC12.83□□□□□ -0.36
LINC01561Q8N1V8 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
LINC01561Q8N1V8 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
LINC01561Q8N1V8 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
LINC01561Q8N1V8 AL162741.1-201ENST00000565563 1558 ntBASIC12.83□□□□□ -0.36
LINC01561Q8N1V8 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC12.83□□□□□ -0.36
LINC01561Q8N1V8 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC12.83□□□□□ -0.36
LINC01561Q8N1V8 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC12.83□□□□□ -0.36
LINC01561Q8N1V8 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
LINC01561Q8N1V8 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
LINC01561Q8N1V8 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
LINC01561Q8N1V8 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms