Protein–RNA interactions for Protein: Q8IZ52

CHPF, Chondroitin sulfate synthase 2, humanhuman

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHPFQ8IZ52 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CHPFQ8IZ52 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CHPFQ8IZ52 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CHPFQ8IZ52 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CHPFQ8IZ52 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CHPFQ8IZ52 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC19.49■□□□□ 0.71
CHPFQ8IZ52 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC19.49■□□□□ 0.71
CHPFQ8IZ52 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CHPFQ8IZ52 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CHPFQ8IZ52 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CHPFQ8IZ52 TSPY5P-201ENST00000426936 936 ntBASIC19.49■□□□□ 0.71
CHPFQ8IZ52 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC19.49■□□□□ 0.71
CHPFQ8IZ52 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC19.49■□□□□ 0.71
CHPFQ8IZ52 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC19.49■□□□□ 0.71
CHPFQ8IZ52 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CHPFQ8IZ52 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC19.49■□□□□ 0.71
CHPFQ8IZ52 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
CHPFQ8IZ52 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CHPFQ8IZ52 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
CHPFQ8IZ52 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
CHPFQ8IZ52 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CHPFQ8IZ52 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC19.49■□□□□ 0.71
CHPFQ8IZ52 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
CHPFQ8IZ52 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC19.49■□□□□ 0.71
CHPFQ8IZ52 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
CHPFQ8IZ52 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC19.48■□□□□ 0.71
CHPFQ8IZ52 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CHPFQ8IZ52 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CHPFQ8IZ52 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CHPFQ8IZ52 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC19.48■□□□□ 0.71
CHPFQ8IZ52 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC19.48■□□□□ 0.71
CHPFQ8IZ52 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
CHPFQ8IZ52 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CHPFQ8IZ52 ANKRD20A18P-201ENST00000359341 492 ntBASIC19.48■□□□□ 0.71
CHPFQ8IZ52 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CHPFQ8IZ52 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CHPFQ8IZ52 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CHPFQ8IZ52 FAM8A6P-201ENST00000407496 1135 ntBASIC19.48■□□□□ 0.71
CHPFQ8IZ52 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC19.48■□□□□ 0.71
CHPFQ8IZ52 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CHPFQ8IZ52 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC19.48■□□□□ 0.71
CHPFQ8IZ52 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CHPFQ8IZ52 AC099778.1-201ENST00000568593 1911 ntBASIC19.48■□□□□ 0.71
CHPFQ8IZ52 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
CHPFQ8IZ52 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC19.48■□□□□ 0.71
CHPFQ8IZ52 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CHPFQ8IZ52 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC19.48■□□□□ 0.71
CHPFQ8IZ52 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
CHPFQ8IZ52 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CHPFQ8IZ52 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
CHPFQ8IZ52 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC19.48■□□□□ 0.71
CHPFQ8IZ52 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CHPFQ8IZ52 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC19.48■□□□□ 0.71
CHPFQ8IZ52 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CHPFQ8IZ52 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
CHPFQ8IZ52 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC19.47■□□□□ 0.71
CHPFQ8IZ52 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC19.47■□□□□ 0.71
CHPFQ8IZ52 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CHPFQ8IZ52 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CHPFQ8IZ52 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
CHPFQ8IZ52 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CHPFQ8IZ52 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC19.47■□□□□ 0.71
CHPFQ8IZ52 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC19.47■□□□□ 0.71
CHPFQ8IZ52 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
CHPFQ8IZ52 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CHPFQ8IZ52 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
CHPFQ8IZ52 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC19.47■□□□□ 0.71
CHPFQ8IZ52 PRSS44-201ENST00000515154 1146 ntBASIC19.47■□□□□ 0.71
CHPFQ8IZ52 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC19.47■□□□□ 0.71
CHPFQ8IZ52 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CHPFQ8IZ52 AP003041.3-201ENST00000527151 707 ntBASIC19.47■□□□□ 0.71
CHPFQ8IZ52 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC19.47■□□□□ 0.71
CHPFQ8IZ52 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC19.47■□□□□ 0.71
CHPFQ8IZ52 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
CHPFQ8IZ52 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC19.47■□□□□ 0.71
CHPFQ8IZ52 AL031432.5-201ENST00000641059 760 ntBASIC19.47■□□□□ 0.71
CHPFQ8IZ52 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC19.47■□□□□ 0.71
CHPFQ8IZ52 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
CHPFQ8IZ52 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CHPFQ8IZ52 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CHPFQ8IZ52 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CHPFQ8IZ52 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
CHPFQ8IZ52 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC19.47■□□□□ 0.71
CHPFQ8IZ52 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC19.46■□□□□ 0.71
CHPFQ8IZ52 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC19.46■□□□□ 0.71
CHPFQ8IZ52 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
CHPFQ8IZ52 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CHPFQ8IZ52 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CHPFQ8IZ52 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CHPFQ8IZ52 KRT8P11-201ENST00000409686 1436 ntBASIC19.46■□□□□ 0.71
CHPFQ8IZ52 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
CHPFQ8IZ52 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC19.46■□□□□ 0.71
CHPFQ8IZ52 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CHPFQ8IZ52 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CHPFQ8IZ52 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CHPFQ8IZ52 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC19.46■□□□□ 0.71
CHPFQ8IZ52 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC19.46■□□□□ 0.71
CHPFQ8IZ52 SAPCD2P2-201ENST00000431719 1174 ntBASIC19.46■□□□□ 0.71
CHPFQ8IZ52 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC19.46■□□□□ 0.71
CHPFQ8IZ52 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC19.46■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms