Protein–RNA interactions for Protein: Q8IV31

TMEM139, Transmembrane protein 139, humanhuman

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM139Q8IV31 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC20.62■□□□□ 0.89
TMEM139Q8IV31 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
TMEM139Q8IV31 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
TMEM139Q8IV31 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC20.62■□□□□ 0.89
TMEM139Q8IV31 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TMEM139Q8IV31 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
TMEM139Q8IV31 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TMEM139Q8IV31 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC20.62■□□□□ 0.89
TMEM139Q8IV31 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
TMEM139Q8IV31 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC20.61■□□□□ 0.89
TMEM139Q8IV31 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TMEM139Q8IV31 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
TMEM139Q8IV31 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC20.61■□□□□ 0.89
TMEM139Q8IV31 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TMEM139Q8IV31 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
TMEM139Q8IV31 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TMEM139Q8IV31 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
TMEM139Q8IV31 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TMEM139Q8IV31 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC20.61■□□□□ 0.89
TMEM139Q8IV31 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
TMEM139Q8IV31 RER1-204ENST00000378518 522 ntTSL 3 BASIC20.61■□□□□ 0.89
TMEM139Q8IV31 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC20.61■□□□□ 0.89
TMEM139Q8IV31 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
TMEM139Q8IV31 RPS2P52-201ENST00000469610 820 ntBASIC20.61■□□□□ 0.89
TMEM139Q8IV31 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC20.61■□□□□ 0.89
TMEM139Q8IV31 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TMEM139Q8IV31 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
TMEM139Q8IV31 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
TMEM139Q8IV31 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC20.61■□□□□ 0.89
TMEM139Q8IV31 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC20.61■□□□□ 0.89
TMEM139Q8IV31 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC20.61■□□□□ 0.89
TMEM139Q8IV31 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TMEM139Q8IV31 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC20.61■□□□□ 0.89
TMEM139Q8IV31 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC20.61■□□□□ 0.89
TMEM139Q8IV31 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC20.61■□□□□ 0.89
TMEM139Q8IV31 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TMEM139Q8IV31 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC20.61■□□□□ 0.89
TMEM139Q8IV31 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC20.61■□□□□ 0.89
TMEM139Q8IV31 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC20.6■□□□□ 0.89
TMEM139Q8IV31 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
TMEM139Q8IV31 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TMEM139Q8IV31 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC20.6■□□□□ 0.89
TMEM139Q8IV31 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
TMEM139Q8IV31 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
TMEM139Q8IV31 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC20.6■□□□□ 0.89
TMEM139Q8IV31 AP006587.1-201ENST00000534129 1502 ntBASIC20.6■□□□□ 0.89
TMEM139Q8IV31 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TMEM139Q8IV31 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TMEM139Q8IV31 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
TMEM139Q8IV31 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
TMEM139Q8IV31 GXYLT1P2-201ENST00000433312 1230 ntBASIC20.6■□□□□ 0.89
TMEM139Q8IV31 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
TMEM139Q8IV31 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC20.6■□□□□ 0.89
TMEM139Q8IV31 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
TMEM139Q8IV31 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
TMEM139Q8IV31 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TMEM139Q8IV31 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
TMEM139Q8IV31 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
TMEM139Q8IV31 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
TMEM139Q8IV31 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
TMEM139Q8IV31 CRK-204ENST00000574295 1391 ntTSL 5 BASIC20.59■□□□□ 0.89
TMEM139Q8IV31 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
TMEM139Q8IV31 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
TMEM139Q8IV31 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TMEM139Q8IV31 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TMEM139Q8IV31 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
TMEM139Q8IV31 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
TMEM139Q8IV31 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC20.59■□□□□ 0.89
TMEM139Q8IV31 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
TMEM139Q8IV31 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TMEM139Q8IV31 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC20.59■□□□□ 0.89
TMEM139Q8IV31 AL390719.1-204ENST00000412397 1219 ntBASIC20.59■□□□□ 0.89
TMEM139Q8IV31 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
TMEM139Q8IV31 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
TMEM139Q8IV31 KRT18P16-201ENST00000510337 1294 ntBASIC20.59■□□□□ 0.89
TMEM139Q8IV31 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC20.59■□□□□ 0.89
TMEM139Q8IV31 AC133552.2-202ENST00000575694 574 ntBASIC20.59■□□□□ 0.89
TMEM139Q8IV31 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC20.59■□□□□ 0.89
TMEM139Q8IV31 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC20.59■□□□□ 0.89
TMEM139Q8IV31 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC20.59■□□□□ 0.89
TMEM139Q8IV31 AC006557.6-201ENST00000623071 864 ntBASIC20.59■□□□□ 0.89
TMEM139Q8IV31 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TMEM139Q8IV31 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC20.59■□□□□ 0.89
TMEM139Q8IV31 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
TMEM139Q8IV31 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
TMEM139Q8IV31 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
TMEM139Q8IV31 AL162741.1-201ENST00000565563 1558 ntBASIC20.59■□□□□ 0.89
TMEM139Q8IV31 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
TMEM139Q8IV31 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
TMEM139Q8IV31 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
TMEM139Q8IV31 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC20.58■□□□□ 0.89
TMEM139Q8IV31 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC20.58■□□□□ 0.89
TMEM139Q8IV31 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
TMEM139Q8IV31 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
TMEM139Q8IV31 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
TMEM139Q8IV31 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
TMEM139Q8IV31 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
TMEM139Q8IV31 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
TMEM139Q8IV31 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
TMEM139Q8IV31 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 45.4 ms