Protein–RNA interactions for Protein: Q86UQ8

NFE4, Transcription factor NF-E4, humanhuman

Predictions only

Length 179 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFE4Q86UQ8 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
NFE4Q86UQ8 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
NFE4Q86UQ8 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC13.69□□□□□ -0.22
NFE4Q86UQ8 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC13.69□□□□□ -0.22
NFE4Q86UQ8 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC13.69□□□□□ -0.22
NFE4Q86UQ8 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC13.69□□□□□ -0.22
NFE4Q86UQ8 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC13.69□□□□□ -0.22
NFE4Q86UQ8 ITM2C-210ENST00000620962 501 ntBASIC13.69□□□□□ -0.22
NFE4Q86UQ8 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC13.69□□□□□ -0.22
NFE4Q86UQ8 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
NFE4Q86UQ8 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC13.69□□□□□ -0.22
NFE4Q86UQ8 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
NFE4Q86UQ8 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
NFE4Q86UQ8 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC13.69□□□□□ -0.22
NFE4Q86UQ8 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC13.69□□□□□ -0.22
NFE4Q86UQ8 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC13.69□□□□□ -0.22
NFE4Q86UQ8 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
NFE4Q86UQ8 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
NFE4Q86UQ8 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
NFE4Q86UQ8 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC13.69□□□□□ -0.22
NFE4Q86UQ8 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
NFE4Q86UQ8 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
NFE4Q86UQ8 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
NFE4Q86UQ8 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC13.69□□□□□ -0.22
NFE4Q86UQ8 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
NFE4Q86UQ8 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
NFE4Q86UQ8 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
NFE4Q86UQ8 AC135050.7-201ENST00000624508 2218 ntBASIC13.68□□□□□ -0.22
NFE4Q86UQ8 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
NFE4Q86UQ8 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC13.68□□□□□ -0.22
NFE4Q86UQ8 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
NFE4Q86UQ8 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
NFE4Q86UQ8 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
NFE4Q86UQ8 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
NFE4Q86UQ8 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
NFE4Q86UQ8 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
NFE4Q86UQ8 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
NFE4Q86UQ8 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
NFE4Q86UQ8 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC13.68□□□□□ -0.22
NFE4Q86UQ8 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC13.68□□□□□ -0.22
NFE4Q86UQ8 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
NFE4Q86UQ8 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
NFE4Q86UQ8 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
NFE4Q86UQ8 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
NFE4Q86UQ8 ESRRAP1-201ENST00000400596 1257 ntBASIC13.68□□□□□ -0.22
NFE4Q86UQ8 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
NFE4Q86UQ8 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC13.68□□□□□ -0.22
NFE4Q86UQ8 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC13.68□□□□□ -0.22
NFE4Q86UQ8 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC13.68□□□□□ -0.22
NFE4Q86UQ8 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
NFE4Q86UQ8 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
NFE4Q86UQ8 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC13.68□□□□□ -0.22
NFE4Q86UQ8 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC13.68□□□□□ -0.22
NFE4Q86UQ8 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
NFE4Q86UQ8 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
NFE4Q86UQ8 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
NFE4Q86UQ8 AC099398.1-201ENST00000567919 2776 ntBASIC13.68□□□□□ -0.22
NFE4Q86UQ8 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC13.68□□□□□ -0.22
NFE4Q86UQ8 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC13.68□□□□□ -0.22
NFE4Q86UQ8 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
NFE4Q86UQ8 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC13.68□□□□□ -0.22
NFE4Q86UQ8 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC13.68□□□□□ -0.22
NFE4Q86UQ8 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC13.68□□□□□ -0.22
NFE4Q86UQ8 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC13.68□□□□□ -0.22
NFE4Q86UQ8 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
NFE4Q86UQ8 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
NFE4Q86UQ8 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC13.68□□□□□ -0.22
NFE4Q86UQ8 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC13.68□□□□□ -0.22
NFE4Q86UQ8 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
NFE4Q86UQ8 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
NFE4Q86UQ8 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
NFE4Q86UQ8 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
NFE4Q86UQ8 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
NFE4Q86UQ8 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
NFE4Q86UQ8 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC13.67□□□□□ -0.22
NFE4Q86UQ8 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC13.67□□□□□ -0.22
NFE4Q86UQ8 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
NFE4Q86UQ8 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
NFE4Q86UQ8 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
NFE4Q86UQ8 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC13.67□□□□□ -0.22
NFE4Q86UQ8 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
NFE4Q86UQ8 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
NFE4Q86UQ8 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
NFE4Q86UQ8 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
NFE4Q86UQ8 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
NFE4Q86UQ8 MFF-205ENST00000354503 1085 ntTSL 2 BASIC13.67□□□□□ -0.22
NFE4Q86UQ8 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
NFE4Q86UQ8 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC13.67□□□□□ -0.22
NFE4Q86UQ8 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC13.67□□□□□ -0.22
NFE4Q86UQ8 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC13.67□□□□□ -0.22
NFE4Q86UQ8 AC026366.1-201ENST00000488803 879 ntBASIC13.67□□□□□ -0.22
NFE4Q86UQ8 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
NFE4Q86UQ8 UNC93B5-201ENST00000530315 699 ntBASIC13.67□□□□□ -0.22
NFE4Q86UQ8 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
NFE4Q86UQ8 C2orf69P4-201ENST00000565394 541 ntBASIC13.67□□□□□ -0.22
NFE4Q86UQ8 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
NFE4Q86UQ8 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
NFE4Q86UQ8 AL356652.1-201ENST00000615962 565 ntBASIC13.67□□□□□ -0.22
NFE4Q86UQ8 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC13.67□□□□□ -0.22
NFE4Q86UQ8 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 49.4 ms