Protein–RNA interactions for Protein: Q6IQ49

SDE2, Protein SDE2 homolog, humanhuman

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDE2Q6IQ49 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SDE2Q6IQ49 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC19.41■□□□□ 0.7
SDE2Q6IQ49 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SDE2Q6IQ49 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC19.41■□□□□ 0.7
SDE2Q6IQ49 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC19.41■□□□□ 0.7
SDE2Q6IQ49 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SDE2Q6IQ49 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
SDE2Q6IQ49 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
SDE2Q6IQ49 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC19.4■□□□□ 0.7
SDE2Q6IQ49 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
SDE2Q6IQ49 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
SDE2Q6IQ49 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC19.4■□□□□ 0.7
SDE2Q6IQ49 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SDE2Q6IQ49 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SDE2Q6IQ49 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SDE2Q6IQ49 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SDE2Q6IQ49 UPK3BP1-201ENST00000428678 509 ntBASIC19.4■□□□□ 0.7
SDE2Q6IQ49 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC19.4■□□□□ 0.7
SDE2Q6IQ49 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC19.4■□□□□ 0.7
SDE2Q6IQ49 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC19.4■□□□□ 0.7
SDE2Q6IQ49 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SDE2Q6IQ49 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SDE2Q6IQ49 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SDE2Q6IQ49 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC19.4■□□□□ 0.7
SDE2Q6IQ49 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SDE2Q6IQ49 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC19.4■□□□□ 0.7
SDE2Q6IQ49 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
SDE2Q6IQ49 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
SDE2Q6IQ49 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SDE2Q6IQ49 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
SDE2Q6IQ49 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC19.39■□□□□ 0.69
SDE2Q6IQ49 AL031133.1-201ENST00000406807 723 ntBASIC19.39■□□□□ 0.69
SDE2Q6IQ49 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SDE2Q6IQ49 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC19.39■□□□□ 0.69
SDE2Q6IQ49 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC19.39■□□□□ 0.69
SDE2Q6IQ49 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC19.39■□□□□ 0.69
SDE2Q6IQ49 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC19.39■□□□□ 0.69
SDE2Q6IQ49 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
SDE2Q6IQ49 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC19.39■□□□□ 0.69
SDE2Q6IQ49 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
SDE2Q6IQ49 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SDE2Q6IQ49 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SDE2Q6IQ49 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
SDE2Q6IQ49 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
SDE2Q6IQ49 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SDE2Q6IQ49 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SDE2Q6IQ49 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC19.38■□□□□ 0.69
SDE2Q6IQ49 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SDE2Q6IQ49 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC19.38■□□□□ 0.69
SDE2Q6IQ49 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SDE2Q6IQ49 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
SDE2Q6IQ49 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC19.38■□□□□ 0.69
SDE2Q6IQ49 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC19.38■□□□□ 0.69
SDE2Q6IQ49 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC19.38■□□□□ 0.69
SDE2Q6IQ49 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SDE2Q6IQ49 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC19.38■□□□□ 0.69
SDE2Q6IQ49 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC19.38■□□□□ 0.69
SDE2Q6IQ49 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SDE2Q6IQ49 MYC-208ENST00000641036 567 ntBASIC19.38■□□□□ 0.69
SDE2Q6IQ49 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
SDE2Q6IQ49 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SDE2Q6IQ49 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC19.37■□□□□ 0.69
SDE2Q6IQ49 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC19.37■□□□□ 0.69
SDE2Q6IQ49 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC19.37■□□□□ 0.69
SDE2Q6IQ49 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
SDE2Q6IQ49 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SDE2Q6IQ49 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SDE2Q6IQ49 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SDE2Q6IQ49 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SDE2Q6IQ49 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SDE2Q6IQ49 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SDE2Q6IQ49 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
SDE2Q6IQ49 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SDE2Q6IQ49 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SDE2Q6IQ49 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SDE2Q6IQ49 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SDE2Q6IQ49 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC19.37■□□□□ 0.69
SDE2Q6IQ49 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC19.37■□□□□ 0.69
SDE2Q6IQ49 AL023973.1-201ENST00000624619 620 ntBASIC19.37■□□□□ 0.69
SDE2Q6IQ49 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
SDE2Q6IQ49 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC19.37■□□□□ 0.69
SDE2Q6IQ49 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SDE2Q6IQ49 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
SDE2Q6IQ49 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SDE2Q6IQ49 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SDE2Q6IQ49 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
SDE2Q6IQ49 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
SDE2Q6IQ49 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SDE2Q6IQ49 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
SDE2Q6IQ49 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
SDE2Q6IQ49 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
SDE2Q6IQ49 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SDE2Q6IQ49 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SDE2Q6IQ49 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SDE2Q6IQ49 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
SDE2Q6IQ49 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
SDE2Q6IQ49 KRT8P45-201ENST00000414328 1447 ntBASIC19.36■□□□□ 0.69
SDE2Q6IQ49 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SDE2Q6IQ49 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SDE2Q6IQ49 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms