Protein–RNA interactions for Protein: Q53EL6

PDCD4, Programmed cell death protein 4, humanhuman

Known RBP Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD4Q53EL6 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
PDCD4Q53EL6 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC18.39■□□□□ 0.53
PDCD4Q53EL6 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
PDCD4Q53EL6 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
PDCD4Q53EL6 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
PDCD4Q53EL6 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PDCD4Q53EL6 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
PDCD4Q53EL6 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
PDCD4Q53EL6 MIPEPP3-201ENST00000412105 444 ntBASIC18.39■□□□□ 0.53
PDCD4Q53EL6 CDCA4P2-201ENST00000441182 718 ntBASIC18.39■□□□□ 0.53
PDCD4Q53EL6 OAS3-207ENST00000551007 998 ntTSL 2 BASIC18.39■□□□□ 0.53
PDCD4Q53EL6 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
PDCD4Q53EL6 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC18.39■□□□□ 0.53
PDCD4Q53EL6 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC18.39■□□□□ 0.53
PDCD4Q53EL6 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PDCD4Q53EL6 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
PDCD4Q53EL6 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
PDCD4Q53EL6 AC135050.7-201ENST00000624508 2218 ntBASIC18.39■□□□□ 0.53
PDCD4Q53EL6 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
PDCD4Q53EL6 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
PDCD4Q53EL6 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC18.39■□□□□ 0.53
PDCD4Q53EL6 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC18.39■□□□□ 0.53
PDCD4Q53EL6 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
PDCD4Q53EL6 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
PDCD4Q53EL6 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
PDCD4Q53EL6 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
PDCD4Q53EL6 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
PDCD4Q53EL6 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
PDCD4Q53EL6 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
PDCD4Q53EL6 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC18.38■□□□□ 0.53
PDCD4Q53EL6 AC138932.1-201ENST00000534164 6830 ntBASIC18.38■□□□□ 0.53
PDCD4Q53EL6 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
PDCD4Q53EL6 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PDCD4Q53EL6 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC18.38■□□□□ 0.53
PDCD4Q53EL6 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PDCD4Q53EL6 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PDCD4Q53EL6 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC18.38■□□□□ 0.53
PDCD4Q53EL6 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PDCD4Q53EL6 MIR663A-201ENST00000385250 93 ntBASIC18.38■□□□□ 0.53
PDCD4Q53EL6 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC18.38■□□□□ 0.53
PDCD4Q53EL6 KRT18P16-201ENST00000510337 1294 ntBASIC18.38■□□□□ 0.53
PDCD4Q53EL6 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
PDCD4Q53EL6 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC18.38■□□□□ 0.53
PDCD4Q53EL6 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC18.38■□□□□ 0.53
PDCD4Q53EL6 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
PDCD4Q53EL6 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC18.38■□□□□ 0.53
PDCD4Q53EL6 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PDCD4Q53EL6 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PDCD4Q53EL6 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC18.38■□□□□ 0.53
PDCD4Q53EL6 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PDCD4Q53EL6 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
PDCD4Q53EL6 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PDCD4Q53EL6 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PDCD4Q53EL6 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC18.38■□□□□ 0.53
PDCD4Q53EL6 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC18.38■□□□□ 0.53
PDCD4Q53EL6 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PDCD4Q53EL6 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PDCD4Q53EL6 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
PDCD4Q53EL6 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
PDCD4Q53EL6 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PDCD4Q53EL6 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PDCD4Q53EL6 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
PDCD4Q53EL6 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
PDCD4Q53EL6 METTL15-202ENST00000403099 795 ntTSL 5 BASIC18.37■□□□□ 0.53
PDCD4Q53EL6 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC18.37■□□□□ 0.53
PDCD4Q53EL6 AC026185.1-201ENST00000445748 174 ntBASIC18.37■□□□□ 0.53
PDCD4Q53EL6 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC18.37■□□□□ 0.53
PDCD4Q53EL6 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC18.37■□□□□ 0.53
PDCD4Q53EL6 AC092118.2-201ENST00000613495 667 ntBASIC18.37■□□□□ 0.53
PDCD4Q53EL6 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC18.37■□□□□ 0.53
PDCD4Q53EL6 AC092437.1-201ENST00000624794 1048 ntBASIC18.37■□□□□ 0.53
PDCD4Q53EL6 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
PDCD4Q53EL6 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PDCD4Q53EL6 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
PDCD4Q53EL6 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PDCD4Q53EL6 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PDCD4Q53EL6 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
PDCD4Q53EL6 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PDCD4Q53EL6 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
PDCD4Q53EL6 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PDCD4Q53EL6 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PDCD4Q53EL6 COMP-202ENST00000425807 2292 ntTSL 2 BASIC18.37■□□□□ 0.53
PDCD4Q53EL6 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC18.37■□□□□ 0.53
PDCD4Q53EL6 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PDCD4Q53EL6 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PDCD4Q53EL6 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PDCD4Q53EL6 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PDCD4Q53EL6 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PDCD4Q53EL6 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PDCD4Q53EL6 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
PDCD4Q53EL6 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
PDCD4Q53EL6 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
PDCD4Q53EL6 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC18.36■□□□□ 0.53
PDCD4Q53EL6 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
PDCD4Q53EL6 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC18.36■□□□□ 0.53
PDCD4Q53EL6 AC091874.3-201ENST00000512672 1195 ntBASIC18.36■□□□□ 0.53
PDCD4Q53EL6 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC18.36■□□□□ 0.53
PDCD4Q53EL6 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PDCD4Q53EL6 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC18.36■□□□□ 0.53
PDCD4Q53EL6 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC18.36■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms