Protein–RNA interactions for Protein: Q502W7

CCDC38, Coiled-coil domain-containing protein 38, humanhuman

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38Q502W7 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC19.83■□□□□ 0.76
CCDC38Q502W7 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CCDC38Q502W7 AL161938.1-201ENST00000569833 2180 ntBASIC19.83■□□□□ 0.76
CCDC38Q502W7 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC19.83■□□□□ 0.76
CCDC38Q502W7 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC19.83■□□□□ 0.76
CCDC38Q502W7 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC19.82■□□□□ 0.76
CCDC38Q502W7 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
CCDC38Q502W7 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
CCDC38Q502W7 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CCDC38Q502W7 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CCDC38Q502W7 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
CCDC38Q502W7 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
CCDC38Q502W7 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CCDC38Q502W7 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC19.82■□□□□ 0.76
CCDC38Q502W7 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CCDC38Q502W7 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CCDC38Q502W7 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CCDC38Q502W7 AC073210.2-201ENST00000430369 194 ntBASIC19.82■□□□□ 0.76
CCDC38Q502W7 SLC29A4P2-201ENST00000504749 1089 ntBASIC19.82■□□□□ 0.76
CCDC38Q502W7 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
CCDC38Q502W7 REXO2-208ENST00000539754 791 ntTSL 2 BASIC19.82■□□□□ 0.76
CCDC38Q502W7 HLA-B-256ENST00000639848 1089 ntBASIC19.82■□□□□ 0.76
CCDC38Q502W7 AC133041.1-202ENST00000642053 222 ntBASIC19.82■□□□□ 0.76
CCDC38Q502W7 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CCDC38Q502W7 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CCDC38Q502W7 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC19.82■□□□□ 0.76
CCDC38Q502W7 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
CCDC38Q502W7 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC19.82■□□□□ 0.76
CCDC38Q502W7 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC19.82■□□□□ 0.76
CCDC38Q502W7 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CCDC38Q502W7 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
CCDC38Q502W7 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC19.82■□□□□ 0.76
CCDC38Q502W7 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
CCDC38Q502W7 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC38Q502W7 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC38Q502W7 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC38Q502W7 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC38Q502W7 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC38Q502W7 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
CCDC38Q502W7 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC19.81■□□□□ 0.76
CCDC38Q502W7 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC38Q502W7 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC38Q502W7 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC38Q502W7 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC38Q502W7 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC38Q502W7 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC19.81■□□□□ 0.76
CCDC38Q502W7 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC19.81■□□□□ 0.76
CCDC38Q502W7 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC19.81■□□□□ 0.76
CCDC38Q502W7 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC19.81■□□□□ 0.76
CCDC38Q502W7 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
CCDC38Q502W7 RPS2P52-201ENST00000469610 820 ntBASIC19.81■□□□□ 0.76
CCDC38Q502W7 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC38Q502W7 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC19.81■□□□□ 0.76
CCDC38Q502W7 PNMA6B-201ENST00000538162 1200 ntBASIC19.81■□□□□ 0.76
CCDC38Q502W7 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC19.81■□□□□ 0.76
CCDC38Q502W7 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC38Q502W7 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC38Q502W7 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC38Q502W7 USP49-202ENST00000373010 2446 ntTSL 5 BASIC19.81■□□□□ 0.76
CCDC38Q502W7 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC38Q502W7 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
CCDC38Q502W7 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC19.8■□□□□ 0.76
CCDC38Q502W7 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
CCDC38Q502W7 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CCDC38Q502W7 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
CCDC38Q502W7 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC19.8■□□□□ 0.76
CCDC38Q502W7 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CCDC38Q502W7 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CCDC38Q502W7 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC19.8■□□□□ 0.76
CCDC38Q502W7 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CCDC38Q502W7 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CCDC38Q502W7 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
CCDC38Q502W7 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
CCDC38Q502W7 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC19.8■□□□□ 0.76
CCDC38Q502W7 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
CCDC38Q502W7 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC19.8■□□□□ 0.76
CCDC38Q502W7 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC19.8■□□□□ 0.76
CCDC38Q502W7 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC19.8■□□□□ 0.76
CCDC38Q502W7 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC19.8■□□□□ 0.76
CCDC38Q502W7 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CCDC38Q502W7 AC060766.5-201ENST00000590539 871 ntBASIC19.8■□□□□ 0.76
CCDC38Q502W7 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC19.8■□□□□ 0.76
CCDC38Q502W7 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC19.8■□□□□ 0.76
CCDC38Q502W7 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CCDC38Q502W7 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CCDC38Q502W7 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CCDC38Q502W7 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
CCDC38Q502W7 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CCDC38Q502W7 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CCDC38Q502W7 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
CCDC38Q502W7 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC19.79■□□□□ 0.76
CCDC38Q502W7 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC19.79■□□□□ 0.76
CCDC38Q502W7 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CCDC38Q502W7 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
CCDC38Q502W7 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC19.79■□□□□ 0.76
CCDC38Q502W7 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC19.79■□□□□ 0.76
CCDC38Q502W7 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CCDC38Q502W7 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC19.79■□□□□ 0.76
CCDC38Q502W7 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CCDC38Q502W7 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms