Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
PCDH1Q08174 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PCDH1Q08174 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
PCDH1Q08174 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC18.47■□□□□ 0.55
PCDH1Q08174 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
PCDH1Q08174 RPPH1-201ENST00000516869 333 ntBASIC18.47■□□□□ 0.55
PCDH1Q08174 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC18.47■□□□□ 0.55
PCDH1Q08174 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC18.47■□□□□ 0.55
PCDH1Q08174 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC18.47■□□□□ 0.55
PCDH1Q08174 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC18.47■□□□□ 0.55
PCDH1Q08174 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PCDH1Q08174 CABP2-204ENST00000636477 941 ntTSL 5 BASIC18.47■□□□□ 0.55
PCDH1Q08174 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC18.47■□□□□ 0.55
PCDH1Q08174 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC18.47■□□□□ 0.55
PCDH1Q08174 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
PCDH1Q08174 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PCDH1Q08174 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
PCDH1Q08174 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC18.47■□□□□ 0.55
PCDH1Q08174 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PCDH1Q08174 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PCDH1Q08174 GAS2L1P1-201ENST00000420145 1480 ntBASIC18.46■□□□□ 0.55
PCDH1Q08174 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PCDH1Q08174 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PCDH1Q08174 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
PCDH1Q08174 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PCDH1Q08174 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
PCDH1Q08174 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
PCDH1Q08174 AL353807.1-201ENST00000427475 662 ntBASIC18.46■□□□□ 0.55
PCDH1Q08174 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC18.46■□□□□ 0.55
PCDH1Q08174 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC18.46■□□□□ 0.55
PCDH1Q08174 RARRES2P10-201ENST00000564312 460 ntBASIC18.46■□□□□ 0.55
PCDH1Q08174 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC18.46■□□□□ 0.55
PCDH1Q08174 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC18.46■□□□□ 0.55
PCDH1Q08174 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
PCDH1Q08174 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC18.46■□□□□ 0.55
PCDH1Q08174 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PCDH1Q08174 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC18.46■□□□□ 0.55
PCDH1Q08174 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PCDH1Q08174 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC18.46■□□□□ 0.54
PCDH1Q08174 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
PCDH1Q08174 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC18.45■□□□□ 0.54
PCDH1Q08174 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
PCDH1Q08174 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PCDH1Q08174 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
PCDH1Q08174 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC18.45■□□□□ 0.54
PCDH1Q08174 AC004980.1-204ENST00000429707 299 ntBASIC18.45■□□□□ 0.54
PCDH1Q08174 TSPY23P-201ENST00000440136 739 ntBASIC18.45■□□□□ 0.54
PCDH1Q08174 PPP1R14BP5-201ENST00000440334 435 ntBASIC18.45■□□□□ 0.54
PCDH1Q08174 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC18.45■□□□□ 0.54
PCDH1Q08174 KSR1P1-201ENST00000446298 240 ntBASIC18.45■□□□□ 0.54
PCDH1Q08174 FAM201B-201ENST00000458407 597 ntBASIC18.45■□□□□ 0.54
PCDH1Q08174 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
PCDH1Q08174 C1QBPP2-201ENST00000528754 825 ntBASIC18.45■□□□□ 0.54
PCDH1Q08174 IRX5-204ENST00000560154 879 ntTSL 5 BASIC18.45■□□□□ 0.54
PCDH1Q08174 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC18.45■□□□□ 0.54
PCDH1Q08174 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
PCDH1Q08174 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PCDH1Q08174 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PCDH1Q08174 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
PCDH1Q08174 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
PCDH1Q08174 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PCDH1Q08174 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PCDH1Q08174 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PCDH1Q08174 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PCDH1Q08174 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PCDH1Q08174 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
PCDH1Q08174 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
PCDH1Q08174 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PCDH1Q08174 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
PCDH1Q08174 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC18.44■□□□□ 0.54
PCDH1Q08174 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PCDH1Q08174 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PCDH1Q08174 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
PCDH1Q08174 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PCDH1Q08174 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
PCDH1Q08174 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PCDH1Q08174 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PCDH1Q08174 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PCDH1Q08174 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC18.44■□□□□ 0.54
PCDH1Q08174 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC18.44■□□□□ 0.54
PCDH1Q08174 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PCDH1Q08174 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC18.44■□□□□ 0.54
PCDH1Q08174 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC18.44■□□□□ 0.54
PCDH1Q08174 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC18.44■□□□□ 0.54
PCDH1Q08174 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC18.44■□□□□ 0.54
PCDH1Q08174 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC18.44■□□□□ 0.54
PCDH1Q08174 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC18.44■□□□□ 0.54
PCDH1Q08174 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
PCDH1Q08174 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC18.44■□□□□ 0.54
PCDH1Q08174 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC18.44■□□□□ 0.54
PCDH1Q08174 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC18.44■□□□□ 0.54
PCDH1Q08174 HTR7P1-201ENST00000538670 1336 ntBASIC18.44■□□□□ 0.54
PCDH1Q08174 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
PCDH1Q08174 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
PCDH1Q08174 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PCDH1Q08174 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
PCDH1Q08174 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC18.44■□□□□ 0.54
PCDH1Q08174 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC18.43■□□□□ 0.54
PCDH1Q08174 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PCDH1Q08174 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC18.43■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms