Protein–RNA interactions for Protein: P60228

EIF3E, Eukaryotic translation initiation factor 3 subunit E, humanhuman

Known RBP Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3EP60228 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC19.77■□□□□ 0.76
EIF3EP60228 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
EIF3EP60228 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC19.77■□□□□ 0.76
EIF3EP60228 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
EIF3EP60228 MTDHP1-201ENST00000605323 784 ntBASIC19.77■□□□□ 0.76
EIF3EP60228 AC069544.1-201ENST00000609399 999 ntBASIC19.77■□□□□ 0.76
EIF3EP60228 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC19.77■□□□□ 0.76
EIF3EP60228 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
EIF3EP60228 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC19.77■□□□□ 0.76
EIF3EP60228 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC19.77■□□□□ 0.76
EIF3EP60228 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC19.77■□□□□ 0.76
EIF3EP60228 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC19.77■□□□□ 0.75
EIF3EP60228 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
EIF3EP60228 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.75
EIF3EP60228 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC19.76■□□□□ 0.75
EIF3EP60228 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
EIF3EP60228 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
EIF3EP60228 AL138781.2-201ENST00000617896 1843 ntBASIC19.76■□□□□ 0.75
EIF3EP60228 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC19.76■□□□□ 0.75
EIF3EP60228 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
EIF3EP60228 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
EIF3EP60228 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
EIF3EP60228 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
EIF3EP60228 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
EIF3EP60228 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
EIF3EP60228 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
EIF3EP60228 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
EIF3EP60228 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
EIF3EP60228 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
EIF3EP60228 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
EIF3EP60228 AC233263.1-201ENST00000578059 224 ntBASIC19.76■□□□□ 0.75
EIF3EP60228 AC004264.1-201ENST00000608354 794 ntBASIC19.76■□□□□ 0.75
EIF3EP60228 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC19.76■□□□□ 0.75
EIF3EP60228 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC19.76■□□□□ 0.75
EIF3EP60228 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
EIF3EP60228 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
EIF3EP60228 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC19.76■□□□□ 0.75
EIF3EP60228 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
EIF3EP60228 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
EIF3EP60228 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC19.76■□□□□ 0.75
EIF3EP60228 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
EIF3EP60228 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
EIF3EP60228 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
EIF3EP60228 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
EIF3EP60228 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC19.75■□□□□ 0.75
EIF3EP60228 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
EIF3EP60228 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
EIF3EP60228 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
EIF3EP60228 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
EIF3EP60228 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
EIF3EP60228 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
EIF3EP60228 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
EIF3EP60228 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC19.75■□□□□ 0.75
EIF3EP60228 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
EIF3EP60228 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
EIF3EP60228 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC19.75■□□□□ 0.75
EIF3EP60228 C1QL1P1-201ENST00000568105 661 ntBASIC19.75■□□□□ 0.75
EIF3EP60228 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC19.75■□□□□ 0.75
EIF3EP60228 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC19.75■□□□□ 0.75
EIF3EP60228 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC19.75■□□□□ 0.75
EIF3EP60228 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
EIF3EP60228 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
EIF3EP60228 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
EIF3EP60228 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
EIF3EP60228 FEM1AP3-201ENST00000403722 1741 ntBASIC19.75■□□□□ 0.75
EIF3EP60228 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC19.75■□□□□ 0.75
EIF3EP60228 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC19.75■□□□□ 0.75
EIF3EP60228 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
EIF3EP60228 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
EIF3EP60228 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
EIF3EP60228 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
EIF3EP60228 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
EIF3EP60228 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
EIF3EP60228 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
EIF3EP60228 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
EIF3EP60228 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
EIF3EP60228 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
EIF3EP60228 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
EIF3EP60228 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC19.74■□□□□ 0.75
EIF3EP60228 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
EIF3EP60228 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
EIF3EP60228 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
EIF3EP60228 HLA-A-209ENST00000638375 975 ntBASIC19.74■□□□□ 0.75
EIF3EP60228 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC19.74■□□□□ 0.75
EIF3EP60228 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
EIF3EP60228 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC19.74■□□□□ 0.75
EIF3EP60228 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
EIF3EP60228 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC19.74■□□□□ 0.75
EIF3EP60228 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC19.74■□□□□ 0.75
EIF3EP60228 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC19.74■□□□□ 0.75
EIF3EP60228 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
EIF3EP60228 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
EIF3EP60228 MCC-208ENST00000514701 2855 ntTSL 2 BASIC19.73■□□□□ 0.75
EIF3EP60228 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
EIF3EP60228 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC19.73■□□□□ 0.75
EIF3EP60228 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
EIF3EP60228 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC19.73■□□□□ 0.75
EIF3EP60228 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
EIF3EP60228 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC19.73■□□□□ 0.75
EIF3EP60228 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC19.73■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 49.1 ms