Protein–RNA interactions for Protein: P48729

CSNK1A1, Casein kinase I isoform alpha, humanhuman

Predictions only

Length 337 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1P48729 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CSNK1A1P48729 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
CSNK1A1P48729 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC17.04■□□□□ 0.32
CSNK1A1P48729 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
CSNK1A1P48729 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC17.04■□□□□ 0.32
CSNK1A1P48729 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CSNK1A1P48729 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CSNK1A1P48729 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CSNK1A1P48729 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
CSNK1A1P48729 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
CSNK1A1P48729 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC17.04■□□□□ 0.32
CSNK1A1P48729 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CSNK1A1P48729 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC17.04■□□□□ 0.32
CSNK1A1P48729 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CSNK1A1P48729 AC131212.4-201ENST00000623606 975 ntBASIC17.04■□□□□ 0.32
CSNK1A1P48729 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC17.04■□□□□ 0.32
CSNK1A1P48729 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC17.04■□□□□ 0.32
CSNK1A1P48729 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CSNK1A1P48729 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CSNK1A1P48729 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CSNK1A1P48729 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CSNK1A1P48729 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
CSNK1A1P48729 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CSNK1A1P48729 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
CSNK1A1P48729 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC17.03■□□□□ 0.32
CSNK1A1P48729 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CSNK1A1P48729 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CSNK1A1P48729 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CSNK1A1P48729 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
CSNK1A1P48729 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CSNK1A1P48729 KSR1P1-201ENST00000446298 240 ntBASIC17.03■□□□□ 0.32
CSNK1A1P48729 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CSNK1A1P48729 UBE2SP1-201ENST00000450587 669 ntBASIC17.03■□□□□ 0.32
CSNK1A1P48729 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC17.03■□□□□ 0.32
CSNK1A1P48729 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CSNK1A1P48729 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC17.03■□□□□ 0.32
CSNK1A1P48729 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
CSNK1A1P48729 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CSNK1A1P48729 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC17.03■□□□□ 0.32
CSNK1A1P48729 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC17.03■□□□□ 0.32
CSNK1A1P48729 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
CSNK1A1P48729 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CSNK1A1P48729 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CSNK1A1P48729 AL135905.2-201ENST00000584934 1404 ntBASIC17.03■□□□□ 0.32
CSNK1A1P48729 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CSNK1A1P48729 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC17.03■□□□□ 0.32
CSNK1A1P48729 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
CSNK1A1P48729 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC17.03■□□□□ 0.32
CSNK1A1P48729 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CSNK1A1P48729 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CSNK1A1P48729 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC17.02■□□□□ 0.32
CSNK1A1P48729 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
CSNK1A1P48729 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
CSNK1A1P48729 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CSNK1A1P48729 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CSNK1A1P48729 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CSNK1A1P48729 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC17.02■□□□□ 0.32
CSNK1A1P48729 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC17.02■□□□□ 0.32
CSNK1A1P48729 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CSNK1A1P48729 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CSNK1A1P48729 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CSNK1A1P48729 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
CSNK1A1P48729 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CSNK1A1P48729 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CSNK1A1P48729 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
CSNK1A1P48729 FDX2-207ENST00000494368 584 ntTSL 4 BASIC17.02■□□□□ 0.32
CSNK1A1P48729 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CSNK1A1P48729 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC17.02■□□□□ 0.32
CSNK1A1P48729 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CSNK1A1P48729 AF186192.3-201ENST00000583427 947 ntBASIC17.02■□□□□ 0.32
CSNK1A1P48729 RPS15-203ENST00000586096 570 ntTSL 2 BASIC17.02■□□□□ 0.32
CSNK1A1P48729 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC17.02■□□□□ 0.32
CSNK1A1P48729 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC17.02■□□□□ 0.32
CSNK1A1P48729 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC17.02■□□□□ 0.32
CSNK1A1P48729 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC17.02■□□□□ 0.32
CSNK1A1P48729 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC17.02■□□□□ 0.31
CSNK1A1P48729 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CSNK1A1P48729 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CSNK1A1P48729 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
CSNK1A1P48729 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
CSNK1A1P48729 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC17.01■□□□□ 0.31
CSNK1A1P48729 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
CSNK1A1P48729 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC17.01■□□□□ 0.31
CSNK1A1P48729 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
CSNK1A1P48729 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC17.01■□□□□ 0.31
CSNK1A1P48729 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CSNK1A1P48729 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CSNK1A1P48729 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
CSNK1A1P48729 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
CSNK1A1P48729 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
CSNK1A1P48729 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
CSNK1A1P48729 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC17.01■□□□□ 0.31
CSNK1A1P48729 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CSNK1A1P48729 RPS2P4-201ENST00000476944 856 ntBASIC17.01■□□□□ 0.31
CSNK1A1P48729 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC17.01■□□□□ 0.31
CSNK1A1P48729 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC17.01■□□□□ 0.31
CSNK1A1P48729 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC17.01■□□□□ 0.31
CSNK1A1P48729 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC17.01■□□□□ 0.31
CSNK1A1P48729 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
CSNK1A1P48729 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC17.01■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms