Protein–RNA interactions for Protein: P45973

CBX5, Chromobox protein homolog 5, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX5P45973 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
CBX5P45973 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC16.48■□□□□ 0.23
CBX5P45973 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC16.47■□□□□ 0.23
CBX5P45973 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
CBX5P45973 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
CBX5P45973 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC16.47■□□□□ 0.23
CBX5P45973 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CBX5P45973 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
CBX5P45973 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CBX5P45973 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CBX5P45973 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CBX5P45973 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CBX5P45973 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
CBX5P45973 PCDHB18P-201ENST00000524813 2368 ntBASIC16.47■□□□□ 0.23
CBX5P45973 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CBX5P45973 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CBX5P45973 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC16.47■□□□□ 0.23
CBX5P45973 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC16.47■□□□□ 0.23
CBX5P45973 JTB-203ENST00000368589 1216 ntTSL 2 BASIC16.47■□□□□ 0.23
CBX5P45973 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
CBX5P45973 BMP1-204ENST00000397814 836 ntTSL 4 BASIC16.47■□□□□ 0.23
CBX5P45973 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CBX5P45973 AC016405.3-201ENST00000607710 860 ntBASIC16.47■□□□□ 0.23
CBX5P45973 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC16.47■□□□□ 0.23
CBX5P45973 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
CBX5P45973 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC16.47■□□□□ 0.23
CBX5P45973 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
CBX5P45973 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CBX5P45973 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CBX5P45973 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CBX5P45973 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CBX5P45973 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CBX5P45973 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC16.47■□□□□ 0.23
CBX5P45973 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CBX5P45973 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC16.47■□□□□ 0.23
CBX5P45973 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CBX5P45973 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC16.47■□□□□ 0.23
CBX5P45973 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CBX5P45973 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CBX5P45973 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CBX5P45973 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC16.46■□□□□ 0.23
CBX5P45973 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CBX5P45973 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CBX5P45973 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC16.46■□□□□ 0.23
CBX5P45973 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC16.46■□□□□ 0.23
CBX5P45973 AC099398.1-201ENST00000567919 2776 ntBASIC16.46■□□□□ 0.23
CBX5P45973 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC16.46■□□□□ 0.23
CBX5P45973 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CBX5P45973 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
CBX5P45973 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CBX5P45973 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CBX5P45973 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CBX5P45973 KRT18P68-201ENST00000392293 1000 ntBASIC16.46■□□□□ 0.23
CBX5P45973 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC16.46■□□□□ 0.23
CBX5P45973 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CBX5P45973 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC16.46■□□□□ 0.23
CBX5P45973 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
CBX5P45973 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CBX5P45973 GCK-205ENST00000437084 1385 ntTSL 5 BASIC16.46■□□□□ 0.23
CBX5P45973 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
CBX5P45973 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CBX5P45973 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC16.46■□□□□ 0.23
CBX5P45973 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CBX5P45973 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CBX5P45973 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
CBX5P45973 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC16.46■□□□□ 0.22
CBX5P45973 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.22
CBX5P45973 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC16.46■□□□□ 0.22
CBX5P45973 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
CBX5P45973 AC006333.2-201ENST00000607957 2099 ntBASIC16.46■□□□□ 0.22
CBX5P45973 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
CBX5P45973 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CBX5P45973 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
CBX5P45973 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CBX5P45973 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC16.45■□□□□ 0.22
CBX5P45973 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
CBX5P45973 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CBX5P45973 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
CBX5P45973 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CBX5P45973 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC16.45■□□□□ 0.22
CBX5P45973 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CBX5P45973 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CBX5P45973 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CBX5P45973 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
CBX5P45973 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CBX5P45973 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC16.45■□□□□ 0.22
CBX5P45973 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CBX5P45973 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC16.45■□□□□ 0.22
CBX5P45973 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC16.45■□□□□ 0.22
CBX5P45973 BRI3-207ENST00000539286 699 ntTSL 2 BASIC16.45■□□□□ 0.22
CBX5P45973 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC16.45■□□□□ 0.22
CBX5P45973 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC16.45■□□□□ 0.22
CBX5P45973 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
CBX5P45973 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
CBX5P45973 AL049812.1-201ENST00000432563 2267 ntBASIC16.45■□□□□ 0.22
CBX5P45973 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC16.45■□□□□ 0.22
CBX5P45973 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CBX5P45973 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
CBX5P45973 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC16.45■□□□□ 0.22
CBX5P45973 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 46.4 ms