Protein–RNA interactions for Protein: P43354

NR4A2, Nuclear receptor subfamily 4 group A member 2, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A2P43354 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
NR4A2P43354 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC17.33■□□□□ 0.36
NR4A2P43354 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC17.33■□□□□ 0.36
NR4A2P43354 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
NR4A2P43354 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
NR4A2P43354 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC17.33■□□□□ 0.36
NR4A2P43354 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC17.33■□□□□ 0.36
NR4A2P43354 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
NR4A2P43354 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
NR4A2P43354 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
NR4A2P43354 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
NR4A2P43354 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC17.33■□□□□ 0.36
NR4A2P43354 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
NR4A2P43354 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
NR4A2P43354 AC090340.1-201ENST00000620778 4980 ntBASIC17.33■□□□□ 0.36
NR4A2P43354 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
NR4A2P43354 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC17.33■□□□□ 0.36
NR4A2P43354 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
NR4A2P43354 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
NR4A2P43354 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC17.33■□□□□ 0.36
NR4A2P43354 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC17.32■□□□□ 0.36
NR4A2P43354 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
NR4A2P43354 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
NR4A2P43354 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
NR4A2P43354 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
NR4A2P43354 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
NR4A2P43354 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC17.32■□□□□ 0.36
NR4A2P43354 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC17.32■□□□□ 0.36
NR4A2P43354 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
NR4A2P43354 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
NR4A2P43354 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC17.32■□□□□ 0.36
NR4A2P43354 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
NR4A2P43354 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
NR4A2P43354 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC17.32■□□□□ 0.36
NR4A2P43354 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
NR4A2P43354 LINC01465-201ENST00000408887 1940 ntBASIC17.32■□□□□ 0.36
NR4A2P43354 SAPCD2P1-201ENST00000395413 1184 ntBASIC17.32■□□□□ 0.36
NR4A2P43354 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
NR4A2P43354 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC17.32■□□□□ 0.36
NR4A2P43354 VMO1-204ENST00000441199 741 ntTSL 2 BASIC17.32■□□□□ 0.36
NR4A2P43354 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC17.32■□□□□ 0.36
NR4A2P43354 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC17.32■□□□□ 0.36
NR4A2P43354 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
NR4A2P43354 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC17.32■□□□□ 0.36
NR4A2P43354 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
NR4A2P43354 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
NR4A2P43354 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
NR4A2P43354 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
NR4A2P43354 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC17.32■□□□□ 0.36
NR4A2P43354 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC17.32■□□□□ 0.36
NR4A2P43354 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
NR4A2P43354 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
NR4A2P43354 NOC2LP2-201ENST00000407594 1944 ntBASIC17.31■□□□□ 0.36
NR4A2P43354 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC17.31■□□□□ 0.36
NR4A2P43354 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
NR4A2P43354 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
NR4A2P43354 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC17.31■□□□□ 0.36
NR4A2P43354 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
NR4A2P43354 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
NR4A2P43354 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC17.31■□□□□ 0.36
NR4A2P43354 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
NR4A2P43354 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
NR4A2P43354 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
NR4A2P43354 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC17.31■□□□□ 0.36
NR4A2P43354 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
NR4A2P43354 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
NR4A2P43354 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC17.31■□□□□ 0.36
NR4A2P43354 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
NR4A2P43354 AC007322.3-201ENST00000426526 701 ntBASIC17.31■□□□□ 0.36
NR4A2P43354 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC17.31■□□□□ 0.36
NR4A2P43354 AL158047.1-201ENST00000445918 881 ntBASIC17.31■□□□□ 0.36
NR4A2P43354 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
NR4A2P43354 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
NR4A2P43354 AC142381.4-202ENST00000563973 229 ntBASIC17.31■□□□□ 0.36
NR4A2P43354 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC17.31■□□□□ 0.36
NR4A2P43354 AC060766.5-201ENST00000590539 871 ntBASIC17.31■□□□□ 0.36
NR4A2P43354 MMD2-204ENST00000612910 778 ntTSL 5 BASIC17.31■□□□□ 0.36
NR4A2P43354 HLA-B-256ENST00000639848 1089 ntBASIC17.31■□□□□ 0.36
NR4A2P43354 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
NR4A2P43354 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
NR4A2P43354 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC17.31■□□□□ 0.36
NR4A2P43354 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
NR4A2P43354 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC17.31■□□□□ 0.36
NR4A2P43354 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
NR4A2P43354 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
NR4A2P43354 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
NR4A2P43354 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
NR4A2P43354 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC17.31■□□□□ 0.36
NR4A2P43354 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
NR4A2P43354 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
NR4A2P43354 AC011270.2-201ENST00000624293 2550 ntBASIC17.31■□□□□ 0.36
NR4A2P43354 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
NR4A2P43354 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
NR4A2P43354 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
NR4A2P43354 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
NR4A2P43354 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
NR4A2P43354 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC17.3■□□□□ 0.36
NR4A2P43354 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
NR4A2P43354 EML3-216ENST00000529309 2909 ntTSL 2 BASIC17.3■□□□□ 0.36
NR4A2P43354 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 72.6 ms