Protein–RNA interactions for Protein: P35527

KRT9, Keratin, type I cytoskeletal 9, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT9P35527 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC20.94■□□□□ 0.94
KRT9P35527 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
KRT9P35527 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC20.94■□□□□ 0.94
KRT9P35527 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
KRT9P35527 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC20.94■□□□□ 0.94
KRT9P35527 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
KRT9P35527 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC20.94■□□□□ 0.94
KRT9P35527 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
KRT9P35527 AC008687.6-201ENST00000596318 630 ntBASIC20.94■□□□□ 0.94
KRT9P35527 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
KRT9P35527 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
KRT9P35527 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
KRT9P35527 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
KRT9P35527 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC20.94■□□□□ 0.94
KRT9P35527 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
KRT9P35527 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC20.94■□□□□ 0.94
KRT9P35527 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
KRT9P35527 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
KRT9P35527 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC20.94■□□□□ 0.94
KRT9P35527 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
KRT9P35527 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
KRT9P35527 ANKRD18DP-204ENST00000455355 1975 ntBASIC20.94■□□□□ 0.94
KRT9P35527 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC20.94■□□□□ 0.94
KRT9P35527 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
KRT9P35527 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
KRT9P35527 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
KRT9P35527 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC20.93■□□□□ 0.94
KRT9P35527 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
KRT9P35527 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
KRT9P35527 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
KRT9P35527 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC20.93■□□□□ 0.94
KRT9P35527 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
KRT9P35527 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
KRT9P35527 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
KRT9P35527 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
KRT9P35527 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC20.93■□□□□ 0.94
KRT9P35527 UNC93B4-201ENST00000505679 747 ntBASIC20.93■□□□□ 0.94
KRT9P35527 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
KRT9P35527 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC20.93■□□□□ 0.94
KRT9P35527 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
KRT9P35527 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
KRT9P35527 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC20.93■□□□□ 0.94
KRT9P35527 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
KRT9P35527 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
KRT9P35527 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC20.93■□□□□ 0.94
KRT9P35527 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC20.93■□□□□ 0.94
KRT9P35527 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
KRT9P35527 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
KRT9P35527 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC20.93■□□□□ 0.94
KRT9P35527 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
KRT9P35527 GOLGA6L3-201ENST00000507199 1679 ntBASIC20.93■□□□□ 0.94
KRT9P35527 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
KRT9P35527 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
KRT9P35527 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
KRT9P35527 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
KRT9P35527 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
KRT9P35527 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
KRT9P35527 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
KRT9P35527 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC20.92■□□□□ 0.94
KRT9P35527 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
KRT9P35527 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
KRT9P35527 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
KRT9P35527 RNA5SP413-201ENST00000516373 109 ntBASIC20.92■□□□□ 0.94
KRT9P35527 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
KRT9P35527 AL121906.2-201ENST00000621597 723 ntBASIC20.92■□□□□ 0.94
KRT9P35527 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
KRT9P35527 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC20.92■□□□□ 0.94
KRT9P35527 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
KRT9P35527 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
KRT9P35527 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
KRT9P35527 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
KRT9P35527 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
KRT9P35527 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
KRT9P35527 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC20.92■□□□□ 0.94
KRT9P35527 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC20.92■□□□□ 0.94
KRT9P35527 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC20.92■□□□□ 0.94
KRT9P35527 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
KRT9P35527 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC20.92■□□□□ 0.94
KRT9P35527 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
KRT9P35527 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
KRT9P35527 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
KRT9P35527 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
KRT9P35527 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC20.92■□□□□ 0.94
KRT9P35527 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
KRT9P35527 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
KRT9P35527 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC20.92■□□□□ 0.94
KRT9P35527 WIZP1-201ENST00000531444 2299 ntBASIC20.92■□□□□ 0.94
KRT9P35527 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
KRT9P35527 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
KRT9P35527 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC20.91■□□□□ 0.94
KRT9P35527 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC20.91■□□□□ 0.94
KRT9P35527 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
KRT9P35527 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
KRT9P35527 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC20.91■□□□□ 0.94
KRT9P35527 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC20.91■□□□□ 0.94
KRT9P35527 UNC93B5-201ENST00000530315 699 ntBASIC20.91■□□□□ 0.94
KRT9P35527 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC20.91■□□□□ 0.94
KRT9P35527 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
KRT9P35527 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC20.91■□□□□ 0.94
KRT9P35527 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC20.91■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms